RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 CEP350Q5VT06 3117 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 FRG2CA6NGY1 282 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 HOXB5P09067 269 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 GAAP10253 952 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 ACHEP22303 614 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 CYB561P49447 251 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 DIO1P49895 249 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 PNLIPRP2P54317 469 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 RBM39Q14498 530 aaKnown RBP10.24□□□□□ -0.77
SMPD4-218ENST00000482171 TMEM81Q6P7N7 255 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 ARIH2OSQ8N7S6 290 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 CLRN3Q8NCR9 226 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 HSD17B8Q92506 261 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 SPTSSAQ969W0 71 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 ZNF442Q9H7R0 627 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 DLL4Q9NR61 685 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 PARPBPQ9NWS1 579 aa10.24□□□□□ -0.77
SMPD4-218ENST00000482171 BOKQ9UMX3 212 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-218ENST00000482171 H7C417 338 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 DHRS13Q6UX07 377 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 DGAT2L6Q6ZPD8 337 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 GPA33Q99795 319 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 CALHM2Q9HA72 323 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 KCNIP3Q9Y2W7 256 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 A0A087WUJ7 227 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 RPS10-NUDT3A0A1W2PQS6 291 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 TCRBV16S1A1N1A0A5B0 115 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 FOXS1O43638 330 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 NME2P22392 152 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 CDK2P24941 298 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 SLC6A1P30531 599 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 MPLP40238 635 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 RPS10P46783 165 aaKnown RBP10.23□□□□□ -0.77
SMPD4-218ENST00000482171 ZNF117Q03924 483 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 FOXF1Q12946 379 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 TNK1Q13470 666 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 RHOUQ7L0Q8 258 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 KMT5CQ86Y97 462 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 WDSUB1Q8N9V3 476 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 PRRT1Q99946 306 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 PCED1AQ9H1Q7 454 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 CGGBP1Q9UFW8 167 aaPredicted RBP10.23□□□□□ -0.77
SMPD4-218ENST00000482171 KIF25Q9UIL4 384 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 KCNG2Q9UJ96 466 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 CES1P1Q9UKY3 287 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 RHBDD3Q9Y3P4 386 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 BDP1A6H8Y1 2624 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 HEATR5BQ9P2D3 2071 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 TO15178 435 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 MRPL33O75394 65 aaKnown RBP10.23□□□□□ -0.77
SMPD4-218ENST00000482171 ATG12O94817 140 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 GPANK1O95872 356 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 ERGP11308 486 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 CD79BP40259 229 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 UBE2NP61088 152 aaKnown RBP10.23□□□□□ -0.77
SMPD4-218ENST00000482171 HSF1Q00613 529 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 RSU1Q15404 277 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 CD226Q15762 336 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 FAM189A2Q15884 450 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 TMEM201Q5SNT2 666 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 C6orf15Q6UXA7 325 aaPredicted RBP10.23□□□□□ -0.77
SMPD4-218ENST00000482171 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.23□□□□□ -0.77
SMPD4-218ENST00000482171 OR5D14Q8NGL3 314 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 HAVCR2Q8TDQ0 301 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 ST7LQ8TDW4 575 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 SULT4A1Q9BR01 284 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 SLCO1B1Q9Y6L6 691 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 ROS1P08922 2347 aa10.23□□□□□ -0.77
SMPD4-218ENST00000482171 RAB19A4D1S5 217 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 TNFSF14O43557 240 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 MT-ATP6P00846 226 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 PDGFBP01127 241 aaPredicted RBP10.22□□□□□ -0.77
SMPD4-218ENST00000482171 LINC00271P0C7V0 271 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 CCL4P13236 92 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 ZNF16P17020 682 aaPredicted RBP10.22□□□□□ -0.77
SMPD4-218ENST00000482171 ZP3P21754 424 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 CCL11P51671 97 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 SLC35A1P78382 337 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 ZNF674Q2M3X9 581 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 LINC00303Q3SY05 128 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 SFRP5Q5T4F7 317 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 C1QL3Q5VWW1 255 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 ADAM5Q6NVV9 412 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 C3orf33Q6P1S2 294 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 SLC16A9Q7RTY1 509 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 C1orf210Q8IVY1 113 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 OR51T1Q8NGJ9 327 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 OR10Z1Q8NGY1 313 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 WDR89Q96FK6 387 aaPredicted RBP10.22□□□□□ -0.77
SMPD4-218ENST00000482171 ZNF845Q96IR2 970 aaPredicted RBP10.22□□□□□ -0.77
SMPD4-218ENST00000482171 REV1Q9UBZ9 1251 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 SLC22A13Q9Y226 551 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 SULT1C2O00338 296 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 IFNA17P01571 189 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 CARD18P57730 90 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 CDK5Q00535 292 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 TMEM200AQ86VY9 491 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 ZNF611Q8N823 705 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 OR10G3Q8NGC4 313 aa10.22□□□□□ -0.77
SMPD4-218ENST00000482171 OR5H2Q8NGV7 314 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms