RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 SLC35D3Q5M8T2 416 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 OGFRL1Q5TC84 451 aaPredicted RBP13.15□□□□□ -0.3
COL16A1-211ENST00000479100 LCN1P1Q5VSP4 162 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 C20orf204Q6ZNR8 217 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 CFAP77Q6ZQR2 320 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 PACRGLQ8N7B6 248 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 ZNF611Q8N823 705 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 OR8J1Q8NGP2 316 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 OR1F12Q8NHA8 337 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 SMAP2Q8WU79 429 aaPredicted RBP13.15□□□□□ -0.3
COL16A1-211ENST00000479100 CYGBQ8WWM9 190 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 SLC7A6Q92536 515 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 UBE2FQ969M7 185 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 POM121L2Q96KW2 1035 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 TEAD3Q99594 435 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 PITX2Q99697 317 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 DHRS9Q9BPW9 319 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 TMUB1Q9BVT8 246 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 C8orf4Q9NR00 106 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 FAM118AQ9NWS6 357 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 EIF3KQ9UBQ5 218 aaKnown RBP13.15□□□□□ -0.3
COL16A1-211ENST00000479100 ST6GALNAC2Q9UJ37 374 aa13.15□□□□□ -0.3
COL16A1-211ENST00000479100 GDF2Q9UK05 429 aaPredicted RBP13.15□□□□□ -0.3
COL16A1-211ENST00000479100 NF1P21359 2839 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 LOC100130705A0A1B0GUX0 176 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 RRP9O43818 475 aaKnown RBP13.14□□□□□ -0.31
COL16A1-211ENST00000479100 MRPL3P09001 348 aaKnown RBP13.14□□□□□ -0.31
COL16A1-211ENST00000479100 PSKH1P11801 424 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 SLC2A5P22732 501 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 NR4A1P22736 598 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 DNASE1P24855 282 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 THBS4P35443 961 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 HIST1H3AP68431 136 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 EFNB1P98172 346 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 EIF2B1Q14232 305 aaKnown RBP13.14□□□□□ -0.31
COL16A1-211ENST00000479100 ELFN2Q5R3F8 820 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 HIST2H3PS2Q5TEC6 136 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 AADACL4Q5VUY2 407 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 PAMR1Q6UXH9 720 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 HIST2H3AQ71DI3 136 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 SPATC1Q76KD6 591 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 MEPCEQ7L2J0 689 aaKnown RBP13.14□□□□□ -0.31
COL16A1-211ENST00000479100 DPY19L4Q7Z388 723 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 DCXRQ7Z4W1 244 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 GID4Q8IVV7 300 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 FBXL14Q8N1E6 418 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 RDH12Q96NR8 316 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 CCL19Q99731 98 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 HDHD2Q9H0R4 259 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 VCXQ9H320 206 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 CA10Q9NS85 328 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 CENPMQ9NSP4 180 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 FAIMQ9NVQ4 179 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 DNAJC27Q9NZQ0 273 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 NDRG4Q9ULP0 352 aaKnown RBP13.14□□□□□ -0.31
COL16A1-211ENST00000479100 LAMP3Q9UQV4 416 aa13.14□□□□□ -0.31
COL16A1-211ENST00000479100 CCDC182A6NF36 153 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 VSTM5A8MXK1 200 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 SYNGR3O43761 229 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 RAF1P04049 648 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 LCKP06239 509 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 COX5BP10606 129 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 APOBEC3AP31941 199 aaPredicted RBP13.13□□□□□ -0.31
COL16A1-211ENST00000479100 TAF13Q15543 124 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 NXNL2Q5VZ03 156 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 ARL9Q6T311 187 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 TIGD4Q8IY51 512 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 NUP37Q8NFH4 326 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 MAP6Q96JE9 813 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 MARCH7Q9H992 704 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 RRP15Q9Y3B9 282 aaKnown RBP13.13□□□□□ -0.31
COL16A1-211ENST00000479100 GRIP1Q9Y3R0 1128 aa13.13□□□□□ -0.31
COL16A1-211ENST00000479100 OR6C6A6NF89 314 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 SLC22A31A6NKX4 558 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 DLGAP1O14490 977 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 GPRIN2O60269 458 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 ABHD16AO95870 558 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 SOD3P08294 240 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 DBHP09172 617 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 TTKP33981 857 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 RAD52P43351 418 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 UCP2P55851 309 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 RPS23P62266 143 aaKnown RBP13.12□□□□□ -0.31
COL16A1-211ENST00000479100 NKX6-1P78426 367 aaPredicted RBP13.12□□□□□ -0.31
COL16A1-211ENST00000479100 TEX30Q5JUR7 227 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 AGAP6Q5VW22 663 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 ZNF544Q6NX49 715 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 SHFQ7M4L6 423 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 MUC15Q8N387 334 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 DHRSXQ8N5I4 330 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 THEM6Q8WUY1 208 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 TRUB1Q8WWH5 349 aaKnown RBP13.12□□□□□ -0.31
COL16A1-211ENST00000479100 SLAMF6Q96DU3 332 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 C4orf45Q96LM5 186 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 ZNF582Q96NG8 517 aaPredicted RBP13.12□□□□□ -0.31
COL16A1-211ENST00000479100 COQ7Q99807 217 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 ATF6BQ99941 703 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 FZR1Q9UM11 496 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 CMAHPQ9Y471 501 aa13.12□□□□□ -0.31
COL16A1-211ENST00000479100 E9PQ18 207 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms