RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 MFAP5Q13361 173 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 ATXN7L3Q14CW9 347 aaPredicted RBP9.66□□□□□ -0.86
VPS52-217ENST00000478934 TUSC1Q2TAM9 212 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 FAM74A1Q5RGS3 127 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 STEAP1BQ6NZ63 245 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 CD163Q86VB7 1156 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 BOLLQ8N9W6 283 aaKnown RBP9.66□□□□□ -0.86
VPS52-217ENST00000478934 SLC26A10Q8NG04 563 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 OR4D6Q8NGJ1 314 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 ST7LQ8TDW4 575 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 SPACA5Q96QH8 159 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 OR2A7Q96R45 310 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 MNTQ99583 582 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 B3GNT4Q9C0J1 378 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 APMAPQ9HDC9 416 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 G6PC2Q9NQR9 355 aa9.66□□□□□ -0.86
VPS52-217ENST00000478934 PRMT8Q9NR22 394 aaPredicted RBP9.66□□□□□ -0.86
VPS52-217ENST00000478934 SDK2Q58EX2 2172 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 TRBV11-1A0A0K0K1C0 115 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 TMEM269A0A1B0GVZ9 245 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 B8ZZF3 427 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 NPIPA5E9PKD4 350 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 F5H5P2 479 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 NMBP08949 121 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 HTR2CP28335 458 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 S100A11P31949 105 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 CDAP32320 146 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 RAP2BP61225 183 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 BTN1A1Q13410 526 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 NR0B2Q15466 257 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 FDX2Q6P4F2 183 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 GUSBP11Q6P575 273 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 ANKRD37Q7Z713 158 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 STPG2Q8N412 459 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 EID2Q8N6I1 236 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 NFAM1Q8NET5 270 aaPredicted RBP9.65□□□□□ -0.86
VPS52-217ENST00000478934 ASB10Q8WXI3 467 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 SEH1LQ96EE3 360 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 C5orf34Q96MH7 638 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 REG4Q9BYZ8 158 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 PTGES2Q9H7Z7 377 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 NPIPA1Q9UND3 350 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 KCNMB2Q9Y691 235 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 FRYQ5TBA9 3013 aa9.65□□□□□ -0.86
VPS52-217ENST00000478934 A0A1W2PNR3 127 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 hCG_1807616A0A1W2PRN6 198 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 ZNF814B7Z6K7 855 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 RAMP1O60894 148 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 AMY2AP04746 511 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 HEXBP07686 556 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 AKAIN1P0CW23 69 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 SLC2A1P11166 492 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 ZNF823P16415 610 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 ACHEP22303 614 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 ARHGDIBP52566 201 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 BIDP55957 195 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 MRPS10P82664 201 aaKnown RBP9.65□□□□□ -0.87
VPS52-217ENST00000478934 TLE3Q04726 772 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 CARD17Q5XLA6 110 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 KCTD18Q6PI47 426 aaPredicted RBP9.65□□□□□ -0.87
VPS52-217ENST00000478934 MYO7BQ6PIF6 2116 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 NUP54Q7Z3B4 507 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 GABRG1Q8N1C3 465 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 GVQW1Q8N7I0 195 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 CLEC1AQ8NC01 280 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 OR1J2Q8NGS2 313 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 ASB17Q8WXJ9 295 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 FGGYQ96C11 551 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 SEC22AQ96IW7 307 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 UBE2ZQ9H832 354 aaPredicted RBP9.65□□□□□ -0.87
VPS52-217ENST00000478934 OR52A1Q9UKL2 312 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 SLC5A6Q9Y289 635 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 EML6Q6ZMW3 1958 aa9.65□□□□□ -0.87
VPS52-217ENST00000478934 PHYHO14832 338 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 RP2O75695 350 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 LDOC1O95751 146 aaPredicted RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 RLN2P04090 185 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 CSF1P09603 554 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 IGFBP3P17936 291 aaPredicted RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 ATF4P18848 351 aaPredicted RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 PRKACBP22694 351 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 FAUP35544 74 aaKnown RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 MNDAP41218 407 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 DNASE1L1P49184 302 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 DLX5P56178 289 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 HSF1Q00613 529 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 RSPO4Q2I0M5 234 aaPredicted RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 NKAIN1Q4KMZ8 207 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 OR52W1Q6IF63 320 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 OR10G3Q8NGC4 313 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 PNPLA2Q96AD5 504 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 ZNF275Q9NSD4 429 aaPredicted RBP9.64□□□□□ -0.87
VPS52-217ENST00000478934 KLRF1Q9NZS2 232 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 EMC3Q9P0I2 261 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 A0A1B0GTQ1 180 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 A0A1W2PQM1 296 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 SNRPGP15A8MWD9 76 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 MASP2O00187 686 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 RAB3DO95716 219 aa9.64□□□□□ -0.87
VPS52-217ENST00000478934 IL5P05113 134 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms