RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 LINC00346Q8IVM7 164 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 PROKR2Q8NFJ6 384 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 OR51L1Q8NGJ5 315 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 OR9Q1Q8NGQ5 310 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 OR1F12Q8NHA8 337 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 SLC25A40Q8TBP6 338 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 TEX47Q8TBZ9 253 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 NEU4Q8WWR8 484 aaPredicted RBP13.35□□□□□ -0.27
HMGA1-206ENST00000478214 UTP4Q969X6 686 aaKnown RBP13.35□□□□□ -0.27
HMGA1-206ENST00000478214 MARS2Q96GW9 593 aaKnown RBP13.35□□□□□ -0.27
HMGA1-206ENST00000478214 RBM4Q9BWF3 364 aaKnown RBP13.35□□□□□ -0.27
HMGA1-206ENST00000478214 OR2J1Q9GZK6 312 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 MS4A5Q9H3V2 200 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 MRPL22Q9NWU5 206 aaKnown RBP13.35□□□□□ -0.27
HMGA1-206ENST00000478214 KLHL21Q9UJP4 597 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 NIPBLQ6KC79 2804 aaeCLIP13.34□□□□□ -0.27
HMGA1-206ENST00000478214 TVP23AA6NH52 213 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 ABHD16AO95870 558 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 GYPBP06028 91 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 HEXAP06865 529 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 DBHP09172 617 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 ANXA8P13928 327 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 DAOP14920 347 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 SLC25A16P16260 332 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 ZNF718Q3SXZ3 478 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 TMEM255AQ5JRV8 349 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 SLC18B1Q6NT16 456 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 SHQ1Q6PI26 577 aaKnown RBP13.34□□□□□ -0.27
HMGA1-206ENST00000478214 ARL9Q6T311 187 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 LYPD4Q6UWN0 246 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 UNQ6126/PRO20091Q6UXV3 157 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 ATG16L2Q8NAA4 619 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 GJC3Q8NFK1 279 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 OR2T4Q8NH00 348 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 NMNAT2Q9BZQ4 307 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 ZNF556Q9HAH1 456 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 ELOVL3Q9HB03 270 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 SLCO1C1Q9NYB5 712 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 GRIP1Q9Y3R0 1128 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 C2CD3Q4AC94 2353 aa13.34□□□□□ -0.27
HMGA1-206ENST00000478214 LOC390937A0A1W2PQ73 354 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 RIIAD1A6NNX1 92 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 VWC2LB2RUY7 222 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 LYNX1G3V0Z9 82 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 CIB2O75838 187 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 IFNGP01579 166 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 IGHV3-13P01766 116 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 LYNX1P0DP58 116 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 CLUP10909 449 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 OSMP13725 252 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 GCH1P30793 250 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 GGT2P36268 569 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 ARHGDIAP52565 204 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 SLC25A1P53007 311 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 KRTAP1-1Q07627 177 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 GINS1Q14691 196 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 ATP6AP1Q15904 470 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 ELFN2Q5R3F8 820 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 ACSM5Q6NUN0 579 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 CFAP77Q6ZQR2 320 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 KLF14Q8TD94 323 aaPredicted RBP13.33□□□□□ -0.28
HMGA1-206ENST00000478214 UBASH3BQ8TF42 649 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 IPCEF1Q8WWN9 437 aaPredicted RBP13.33□□□□□ -0.28
HMGA1-206ENST00000478214 GTF3AQ92664 365 aaKnown RBP13.33□□□□□ -0.28
HMGA1-206ENST00000478214 PIMREGQ9BSJ6 248 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 CDADC1Q9BWV3 514 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 HDHD2Q9H0R4 259 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 POFUT1Q9H488 388 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 MYOZ1Q9NP98 299 aaPredicted RBP13.33□□□□□ -0.28
HMGA1-206ENST00000478214 HINT3Q9NQE9 182 aaKnown RBP13.33□□□□□ -0.28
HMGA1-206ENST00000478214 CMC2Q9NRP2 79 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 TBCCD1Q9NVR7 557 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 CYB5R1Q9UHQ9 305 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 ATPIF1Q9UII2 106 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 STARD10Q9Y365 291 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 AP4S1Q9Y587 144 aa13.33□□□□□ -0.28
HMGA1-206ENST00000478214 NSD1Q96L73 2696 aaPredicted RBP13.32□□□□□ -0.28
HMGA1-206ENST00000478214 FAM183AA6NL82 134 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 NDUFS8O00217 210 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 NCR1O76036 304 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 HPXP02790 462 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 ZNF823P16415 610 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 ZNF3P17036 446 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 SPI1P17947 270 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 GRK5P34947 590 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 RPS27P42677 84 aaKnown RBP13.32□□□□□ -0.28
HMGA1-206ENST00000478214 MBNL2Q5VZF2 373 aaKnown RBP13.32□□□□□ -0.28
HMGA1-206ENST00000478214 SLC27A4Q6P1M0 643 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 TMEM154Q6P9G4 183 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 C1orf174Q8IYL3 243 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 ZNF786Q8N393 782 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 OR5K1Q8NHB7 308 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 SNX33Q8WV41 574 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 NRBF2Q96F24 287 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 DUS3LQ96G46 650 aaKnown RBP13.32□□□□□ -0.28
HMGA1-206ENST00000478214 PITX2Q99697 317 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 COQ7Q99807 217 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 HCAR1Q9BXC0 346 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 MED20Q9H944 212 aa13.32□□□□□ -0.28
HMGA1-206ENST00000478214 GPR160Q9UJ42 338 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms