RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MST1P26927 711 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 ITPKBP27987 946 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 GRPRP30550 384 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 FAUP35544 74 aaKnown RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 OR1D4P47884 311 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 PTH2RP49190 550 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 P2RX1P51575 399 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 CCR6P51684 374 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 NR0B1P51843 470 aaKnown RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 POLR2HP52434 150 aaKnown RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 NXPH1P58417 271 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TAS2R20P59543 309 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 RPL27P61353 136 aaKnown RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 HSD11B2P80365 405 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 SRSF2Q01130 221 aaKnown RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 PLCXD2Q0VAA5 305 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 PDCD1Q15116 288 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TOMM20Q15388 145 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 DEFB133Q30KQ1 61 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TMEM69Q5SWH9 247 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 ARHGAP40Q5TG30 622 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 METTL11BQ5VVY1 283 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 SLC18B1Q6NT16 456 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 CRIP3Q6Q6R5 217 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 ESPNLQ6ZVH7 1005 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 PRSS45Q7RTY3 260 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 GRINAQ7Z429 371 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 LRRTM1Q86UE6 522 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TMPRSS12Q86WS5 348 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 KMT5CQ86Y97 462 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 PLXDC1Q8IUK5 500 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 MISPQ8IVT2 679 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 IZUMO1Q8IYV9 350 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 DND1Q8IYX4 353 aaKnown RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 PRR22Q8IZ63 422 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 MAML2Q8IZL2 1156 aaPredicted RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 D2HGDHQ8N465 521 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 FAM109AQ8N4B1 249 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF321PQ8N8H1 164 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 PLPP5Q8NEB5 264 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 OR1N1Q8NGS0 311 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 OR2G2Q8NGZ5 317 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 OR6S1Q8NH40 331 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 OR52I2Q8NH67 350 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 OTOSQ8NHW6 89 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 METTL21AQ8WXB1 218 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 RLN3Q8WXF3 142 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 SNAPC3Q92966 411 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TSLPQ969D9 159 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 OMA1Q96E52 524 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 KTI12Q96EK9 354 aaPredicted RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 MED30Q96HR3 178 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 C4orf45Q96LM5 186 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TSSK2Q96PF2 358 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 OR8B4Q96RC9 309 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 GAL3ST4Q96RP7 486 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 ADOQ96SZ5 270 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 UTP23Q9BRU9 249 aaKnown RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 NUDT9Q9BW91 350 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TPSD1Q9BZJ3 242 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TBL1XR1Q9BZK7 514 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 WWTR1Q9GZV5 400 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF700Q9H0M5 742 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TXNIPQ9H3M7 391 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 GPN1Q9HCN4 374 aaPredicted RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF304Q9HCX3 659 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 SLC17A5Q9NRA2 495 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 ANKRD10Q9NXR5 420 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 SLCO1C1Q9NYB5 712 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TAS2R10Q9NYW0 307 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TAS2R8Q9NYW2 309 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 VSX1Q9NZR4 365 aaPredicted RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 SEMA5BQ9P283 1151 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 OR5V1Q9UGF6 321 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 STEAP1Q9UHE8 339 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 SCP2D1Q9UJQ7 156 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 EDARQ9UNE0 448 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 B9D1Q9UPM9 204 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 WASF3Q9UPY6 502 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 RCE1Q9Y256 329 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 MRPS17Q9Y2R5 130 aaKnown RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TMED7Q9Y3B3 224 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 NPTNQ9Y639 398 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 SLCO1B1Q9Y6L6 691 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 SDK1Q7Z5N4 2213 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 LOC400499M0QZD8 3231 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 PHF3Q92576 2039 aaKnown RBP4.43□□□□□ -1.7
SF3B6-202ENST00000478050 CFAP46Q8IYW2 2715 aa4.43□□□□□ -1.7
SF3B6-202ENST00000478050 TNRC6BQ9UPQ9 1833 aaKnown RBP4.42□□□□□ -1.7
SF3B6-202ENST00000478050 IGHV1OR21-1A0A087WYE8 117 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 A0A1B0GX78 115 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 PRSS37A4D1T9 235 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 A6NIZ1 184 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 NPIPB13A6NJU9 1138 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 A8MVM7 634 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 SNRPGP15A8MWD9 76 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 NPIPB4C9JG80 1138 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 H7C1C5 153 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 DCTN6O00399 190 aa4.42□□□□□ -1.7
SF3B6-202ENST00000478050 AKR7A2O43488 359 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms