RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 OR13C5Q8NGS8 318 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 OR10D3Q8NH80 312 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 CPT1CQ8TCG5 803 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 CHAC2Q8WUX2 184 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 HSD17B8Q92506 261 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 C10orf35Q96D05 121 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 DNAJA3Q96EY1 480 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 S100A16Q96FQ6 103 aaKnown RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 ZC3HAV1LQ96H79 300 aaKnown RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 PSMG3-AS1Q96PY0 264 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 AMELYQ99218 206 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 ULBP2Q9BZM5 246 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 LINC00470Q9BZP3 86 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 SEC61A2Q9H9S3 476 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 ASCL3Q9NQ33 180 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 G6PC2Q9NQR9 355 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 ZNF275Q9NSD4 429 aaPredicted RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 DEPPQ9NTK1 212 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 DDX28Q9NUL7 540 aaKnown RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 IL17BQ9UHF5 180 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 NUFIP1Q9UHK0 495 aaKnown RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 FOXD3Q9UJU5 478 aaPredicted RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 AK6Q9Y3D8 172 aaKnown RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 FLVCR1Q9Y5Y0 555 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 RALGAPA1Q6GYQ0 2036 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 CPAMD8Q8IZJ3 1885 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 SPAARA0A1B0GVQ0 90 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 A0A1W2PQ09 198 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 ZNF716A6NP11 495 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 ZNF891A8MT65 544 aaPredicted RBP7.03□□□□□ -1.28
VMA21-203ENST00000477649 ZNF724A8MTY0 619 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 ZNF814B7Z6K7 855 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 G3V3Y1 287 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 SLC17A2O00624 439 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 SCGNO76038 276 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 GPANK1O95872 356 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 TRAPPC2P0DI81 140 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 TRAPPC2BP0DI82 140 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 TCEA1P23193 301 aaKnown RBP7.03□□□□□ -1.28
VMA21-203ENST00000477649 ART1P52961 327 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 CLDN6P56747 220 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 OR10A3P58181 314 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 AP3S2P59780 193 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 PCBD1P61457 104 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 HIST1H3AP68431 136 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 PLGLB1Q02325 96 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 C19orf57Q0VDD7 668 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 SCRN3Q0VDG4 424 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 RNPS1Q15287 305 aaKnown RBP7.03□□□□□ -1.28
VMA21-203ENST00000477649 TAB1Q15750 504 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 BAK1Q16611 211 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 SLC25A35Q3KQZ1 300 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 WIPI1Q5MNZ9 446 aaPredicted RBP7.03□□□□□ -1.28
VMA21-203ENST00000477649 HIST2H3PS2Q5TEC6 136 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 SPINK14Q6IE38 97 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 LRFN4Q6PJG9 635 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 CCBE1Q6UXH8 406 aaPredicted RBP7.03□□□□□ -1.28
VMA21-203ENST00000477649 LRRC69Q6ZNQ3 347 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 HIST2H3AQ71DI3 136 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 GDPD3Q7L5L3 318 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 DPPA2Q7Z7J5 298 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 GPR137CQ8N3F9 429 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 FAM109AQ8N4B1 249 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 ZNF433Q8N7K0 673 aaPredicted RBP7.03□□□□□ -1.28
VMA21-203ENST00000477649 OR4M1Q8NGD0 313 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 OR6M1Q8NGM8 313 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 SNIP1Q8TAD8 396 aaKnown RBP7.03□□□□□ -1.28
VMA21-203ENST00000477649 ASB5Q8WWX0 329 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 SPTSSAQ969W0 71 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 PTX4Q96A99 478 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 RFT1Q96AA3 541 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 SCMH1Q96GD3 660 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 TTTY12Q9BZ98 90 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 NEK6Q9HC98 313 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 CENPMQ9NSP4 180 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 RBFOX1Q9NWB1 397 aaKnown RBP7.03□□□□□ -1.28
VMA21-203ENST00000477649 FAM206AQ9NX38 181 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 ANKRD10Q9NXR5 420 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 COPZ2Q9P299 210 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 STEAP1Q9UHE8 339 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 ATPIF1Q9UII2 106 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 ZNF391Q9UJN7 358 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 MCTS1Q9ULC4 181 aaKnown RBP7.03□□□□□ -1.28
VMA21-203ENST00000477649 SLC22A13Q9Y226 551 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 EMC9Q9Y3B6 208 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 PCDHGA9Q9Y5G4 932 aaKnown RBP7.03□□□□□ -1.28
VMA21-203ENST00000477649 LHFPL6Q9Y693 200 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 MPDZO75970 2070 aa7.03□□□□□ -1.28
VMA21-203ENST00000477649 hCG_2014768A0A024R1R8 64 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 IGKV1D-43A0A0B4J1Z2 117 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 A0A0G2JMM0 328 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 A0A1B0GVI7 797 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 LOC107986453A0A1B0GWG9 222 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 A0A1W2PPB8 328 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 A0A1W2PRS3 328 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 SMIM30A4D0T7 59 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 DHRS7CA6NNS2 312 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 KIR3DP1A8MWS1 328 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 DVL2O14641 736 aa7.02□□□□□ -1.29
VMA21-203ENST00000477649 TM4SF5O14894 197 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms