RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	ANGPTL1	O95841	491 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	CLPS	P04118	112 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	GSTA2	P09210	222 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	DUX4L4	P0CJ87	422 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	ZNF708	P17019	499 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	IL2RG	P31785	369 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	PTGDS	P41222	190 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	GRIA1	P42261	906 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	ATP5O	P48047	213 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	MARCKSL1	P49006	195 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	TTPA	P49638	278 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	CCR4	P51679	360 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	RAB38	P57729	211 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	BTN3A2	P78410	334 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	BSPH1	Q075Z2	132 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	RGS1	Q08116	209 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	CUL1	Q13616	776 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	HEPACAM	Q14CZ8	416 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	EBP	Q15125	230 aa	Known RBP	3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	TOR1AIP1	Q5JTV8	583 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	PRAMEF7	Q5VXH5	474 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	TIGD3	Q6B0B8	471 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	OR2A2	Q6IF42	318 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	NIPAL1	Q6NVV3	410 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	REG3G	Q6UW15	175 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	ENPP6	Q6UWR7	440 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	DLEU7	Q6UYE1	221 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	CYHR1	Q6ZMK1	362 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	P4HA3	Q7Z4N8	544 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	TMEM185A	Q8NFB2	350 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	OR8K1	Q8NGG5	319 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	S100PBP	Q96BU1	408 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	OR4K3	Q96R72	315 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	PANX2	Q96RD6	677 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	S1PR3	Q99500	378 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	METTL17	Q9H7H0	456 aa	Predicted RBP	3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	LRRC40	Q9H9A6	602 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	RNF122	Q9H9V4	155 aa		3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.54	□□□□□ -1.84
PRKD3-208	ENST00000475912	DYNC2H1	Q8NCM8	4307 aa	Known RBP	3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	LOC100653049	A0A140TA62	436 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	IQCM	A0A1B0GVH7	501 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	LRP5L	A4QPB2	252 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912		H7C417	338 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	APOC4-APOC2	K7ER74	178 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	CTNS	O60931	367 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	KRT34	O76011	436 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	AQP8	O94778	261 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	APOC2	P02655	101 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	CT45A8	P0DMV1	189 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	CT45A9	P0DMV2	189 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	TNNI3	P19429	210 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	PITPNB	P48739	271 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	LIM2	P55344	173 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	BPIFB3	P59826	476 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	IL1RL1	Q01638	556 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	MFGE8	Q08431	387 aa	Predicted RBP	3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	STX4	Q12846	297 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	PPP1R8	Q12972	351 aa	Known RBP	3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	MEF2D	Q14814	521 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	RAB35	Q15286	201 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	TSC22D1	Q15714	1073 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	CT45A2	Q5DJT8	189 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	TRIM40	Q6P9F5	258 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	AGTRAP	Q6RW13	159 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	SCIMP	Q6UWF3	145 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	ANGPTL8	Q6UXH0	198 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	ADAMTSL2	Q86TH1	951 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	IFNE	Q86WN2	208 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	LRRC6	Q86X45	466 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	UBQLNL	Q8IYU4	475 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	BATF2	Q8N1L9	274 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	PRELID2	Q8N945	189 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	CCDC197	Q8NCU1	140 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	OR1J4	Q8NGS1	313 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	C8orf46	Q8TAG6	207 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	FNDC9	Q8TBE3	224 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	RDH11	Q8TC12	318 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	ACTL9	Q8TC94	416 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	MRPL24	Q96A35	216 aa	Known RBP	3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	PPWD1	Q96BP3	646 aa	Known RBP	3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	MRPL53	Q96EL3	112 aa	Known RBP	3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	OCR1	Q9BZK8	76 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	DDX47	Q9H0S4	455 aa	Known RBP	3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	MARCH7	Q9H992	704 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	IL1RAP	Q9NPH3	570 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	ESM1	Q9NQ30	184 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	CHRAC1	Q9NRG0	131 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	DDX28	Q9NUL7	540 aa	Known RBP	3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	ACOXL	Q9NUZ1	547 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	COPS7A	Q9UBW8	275 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	KLK11	Q9UBX7	282 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	MRPS18C	Q9Y3D5	142 aa	Known RBP	3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	SACS	Q9NZJ4	4579 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	MED12L	Q86YW9	2145 aa		3.53	□□□□□ -1.84
PRKD3-208	ENST00000475912	PRR14L	Q5THK1	2151 aa		3.52	□□□□□ -1.85
PRKD3-208	ENST00000475912	COL7A1	Q02388	2944 aa		3.52	□□□□□ -1.85
PRKD3-208	ENST00000475912	RNF103-CHMP3	A0A140T963	221 aa		3.52	□□□□□ -1.85
PRKD3-208	ENST00000475912	C17orf51	A8MQB3	221 aa		3.52	□□□□□ -1.85
PRKD3-208	ENST00000475912	GOLGA8K	D6RF30	607 aa		3.52	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms