RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 MRPS11P82912 194 aaKnown RBP15.28■□□□□ 0.04
UPF3A-203ENST00000474056 CCNIQ14094 377 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 KCNMB1Q16558 191 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 TSTQ16762 297 aaKnown RBP15.28■□□□□ 0.04
UPF3A-203ENST00000474056 PCGF3Q3KNV8 242 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 CLEC12AQ5QGZ9 265 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 ZNF770Q6IQ21 691 aaPredicted RBP15.28■□□□□ 0.04
UPF3A-203ENST00000474056 C1orf174Q8IYL3 243 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 ASB9Q96DX5 294 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 PLA2G12AQ9BZM1 189 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 TRIM15Q9C019 465 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 RACGAP1Q9H0H5 632 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 NARFLQ9H6Q4 476 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 CDC42EP3Q9UKI2 254 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 GRIP1Q9Y3R0 1128 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 LHFPL6Q9Y693 200 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 CDH10Q9Y6N8 788 aa15.28■□□□□ 0.04
UPF3A-203ENST00000474056 OR6C68A6NDL8 312 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 OR6C6A6NF89 314 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 ZSCAN5BA6NJL1 495 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 H3BSA7 217 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 WNT9BO14905 357 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 GASTP01350 101 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 IGHV1-46P01743 117 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 MT-ND5P03915 603 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 FAM98BQ52LJ0 330 aaKnown RBP15.27■□□□□ 0.04
UPF3A-203ENST00000474056 SLC35F1Q5T1Q4 408 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 ARL9Q6T311 187 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 IL17RELQ6ZVW7 336 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 LINC00471Q8N535 108 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 OR8D4Q8NGM9 314 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 OR1F12Q8NHA8 337 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 BCAS4Q8TDM0 211 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 HPS1Q92902 700 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 TBCCD1Q9NVR7 557 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 U3KQV3 271 aa15.27■□□□□ 0.04
UPF3A-203ENST00000474056 WNK2Q9Y3S1 2297 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 BHLHE40O14503 412 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 TPD52L2O43399 206 aaKnown RBP15.26■□□□□ 0.03
UPF3A-203ENST00000474056 PPIHO43447 177 aaKnown RBP15.26■□□□□ 0.03
UPF3A-203ENST00000474056 SPRY3O43610 288 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 IDH3BO43837 385 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 DBHP09172 617 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 TMEM33P57088 247 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.26■□□□□ 0.03
UPF3A-203ENST00000474056 PSG7Q13046 419 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 OR2T5Q6IEZ7 315 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 PGM2L1Q6PCE3 622 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 CORO6Q6QEF8 472 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 RASSF6Q6ZTQ3 369 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 USP51Q70EK9 711 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 TRPM8Q7Z2W7 1104 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 ZBTB46Q86UZ6 589 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 SLC26A10Q8NG04 563 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 OR52L1Q8NGH7 329 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 OR52E2Q8NGJ4 325 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 OR2T29Q8NH02 315 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 CLDND2Q8NHS1 167 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 THTPAQ9BU02 230 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 BEX2Q9BXY8 128 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 SHARPINQ9H0F6 387 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 SAP30LQ9HAJ7 183 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 DECR2Q9NUI1 292 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 IL20Q9NYY1 176 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 SAMHD1Q9Y3Z3 626 aaKnown RBP15.26■□□□□ 0.03
UPF3A-203ENST00000474056 CACNG2Q9Y698 323 aa15.26■□□□□ 0.03
UPF3A-203ENST00000474056 IGHV1-69-2A0A0G2JMI3 117 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 PLSCR5A0PG75 271 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 ACOT8O14734 319 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 TIMM8AO60220 97 aaPredicted RBP15.25■□□□□ 0.03
UPF3A-203ENST00000474056 UBOX5O94941 541 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 TFP02787 698 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 FAM157CP0CG43 387 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 CRYBB2P43320 205 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 HIST1H3AP68431 136 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 TEKQ02763 1124 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 FAM209AQ5JX71 171 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 HIST2H3PS2Q5TEC6 136 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 RPL13AP3Q6NVV1 102 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 HIST2H3AQ71DI3 136 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 LINC00346Q8IVM7 164 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 LINC01356Q8N9X3 169 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 AQP11Q8NBQ7 271 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 NPEPL1Q8NDH3 523 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 GJC3Q8NFK1 279 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 C1orf159Q96HA4 380 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 LRGUKQ96M69 825 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 MDFIQ99750 246 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 REEP1Q9H902 201 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 MSL2Q9HCI7 577 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 LPAR3Q9UBY5 353 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 ATPIF1Q9UII2 106 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 KLHL21Q9UJP4 597 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 STARD10Q9Y365 291 aa15.25■□□□□ 0.03
UPF3A-203ENST00000474056 ARHGAP32A7KAX9 2087 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 RAP2AP10114 183 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 GSTM3P21266 225 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 ERFP50548 548 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 CDH15P55291 814 aa15.24■□□□□ 0.03
UPF3A-203ENST00000474056 COX10Q12887 443 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms