RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 C11orf71Q6IPW1 123 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 SLC16A14Q7RTX9 510 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 DTX2Q86UW9 622 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 ZBTB46Q86UZ6 589 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 MDP1Q86V88 176 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 MYPOPQ86VE0 399 aaPredicted RBP7.91□□□□□ -1.14
SMC4-213ENST00000472282 OR6V1Q8N148 313 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 EME1Q96AY2 570 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 DDOQ99489 341 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 GABARAPL3Q9BY60 117 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 RACGAP1Q9H0H5 632 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 RIBC2Q9H4K1 309 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 MED20Q9H944 212 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 SIAEQ9HAT2 523 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 EMC7Q9NPA0 242 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 POLE4Q9NR33 117 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 B3GNT2Q9NY97 397 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 USE1Q9NZ43 259 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 B9D1Q9UPM9 204 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 ORC6Q9Y5N6 252 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 FKBP7Q9Y680 259 aa7.91□□□□□ -1.14
SMC4-213ENST00000472282 NSD1Q96L73 2696 aaPredicted RBP7.91□□□□□ -1.14
SMC4-213ENST00000472282 IGHV1-18A0A0C4DH31 117 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.9□□□□□ -1.14
SMC4-213ENST00000472282 ZAR1LA6NP61 321 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 M0R129 80 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 SURF4O15260 269 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 MGRN1O60291 552 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 MPZL1O95297 269 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 RAB36O95755 333 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 IGKV3-15P01624 115 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 HMGN1P05114 100 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 CST2P09228 141 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 MMP7P09237 267 aaPredicted RBP7.9□□□□□ -1.14
SMC4-213ENST00000472282 CECR9P0C854 216 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 GAAP10253 952 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 CLUP10909 449 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 CBR1P16152 277 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 ZNF32P17041 273 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 PEX2P28328 305 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 POLR2IP36954 125 aaKnown RBP7.9□□□□□ -1.14
SMC4-213ENST00000472282 RAB1AP62820 205 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 ENDOGQ14249 297 aaKnown RBP7.9□□□□□ -1.14
SMC4-213ENST00000472282 MEP1BQ16820 701 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 ZIK1Q3SY52 487 aaPredicted RBP7.9□□□□□ -1.14
SMC4-213ENST00000472282 SLC36A2Q495M3 483 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 FAM27BQ5VT28 67 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 SLX4IPQ5VYV7 408 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 LPCAT4Q643R3 524 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 UGT2A3Q6UWM9 527 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 TMEM108Q6UXF1 575 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 ZBTB49Q6ZSB9 765 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.9□□□□□ -1.14
SMC4-213ENST00000472282 GLB1L2Q8IW92 636 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 CCDC36Q8IYA8 594 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 PROKR2Q8NFJ6 384 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 OR51L1Q8NGJ5 315 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 OR2T4Q8NH00 348 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 C11orf40Q8WZ69 217 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 OTULINQ96BN8 352 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 TRMT61AQ96FX7 289 aaKnown RBP7.9□□□□□ -1.14
SMC4-213ENST00000472282 PLEKHA8Q96JA3 519 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 SLC38A2Q96QD8 506 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 SLC29A1Q99808 456 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 ZNF416Q9BWM5 594 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 HCAR1Q9BXC0 346 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 CACNG6Q9BXT2 260 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 TEX12Q9BXU0 123 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 PRRG3Q9BZD7 231 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 NMNAT2Q9BZQ4 307 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 RNF121Q9H920 327 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 CCNB1IP1Q9NPC3 277 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 HINT3Q9NQE9 182 aaKnown RBP7.9□□□□□ -1.14
SMC4-213ENST00000472282 TVP23BQ9NYZ1 205 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 CRNNQ9UBG3 495 aaPredicted RBP7.9□□□□□ -1.14
SMC4-213ENST00000472282 POLR1DQ9Y2S0 133 aa7.9□□□□□ -1.14
SMC4-213ENST00000472282 CSPG4Q6UVK1 2322 aa7.9□□□□□ -1.15
SMC4-213ENST00000472282 ABCA1O95477 2261 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 TVP23AA6NH52 213 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 PRR23D1E9PI22 279 aaPredicted RBP7.89□□□□□ -1.15
SMC4-213ENST00000472282 SSX4O60224 188 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 IGLV1-44P01699 117 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 HLA-DQA2P01906 255 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 PRR23D2P0DMB1 279 aaPredicted RBP7.89□□□□□ -1.15
SMC4-213ENST00000472282 ZNF14P17017 642 aaPredicted RBP7.89□□□□□ -1.15
SMC4-213ENST00000472282 SPI1P17947 270 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 PAICSP22234 425 aaKnown RBP7.89□□□□□ -1.15
SMC4-213ENST00000472282 PAX7P23759 505 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 PTAFRP25105 342 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 TTKP33981 857 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 ADMP35318 185 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 ARR3P36575 388 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 SLC25A1P53007 311 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 RAD23AP54725 363 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 GLO1Q04760 184 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 RAB39AQ14964 217 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 SNAPC1Q16533 368 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 LRRC36Q1X8D7 754 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 C12orf73Q69YU5 71 aa7.89□□□□□ -1.15
SMC4-213ENST00000472282 TMEM53Q6P2H8 277 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms