RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 C6orf89Q6UWU4 347 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 Q6ZT83 130 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 CCDC121Q6ZUS5 278 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 LINGO2Q7L985 606 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 BHLHA15Q7RTS1 189 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-208ENST00000469585 CALHM3Q86XJ0 350 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 LINC00471Q8N535 108 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 PRR26Q8N8Z3 221 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 OR6T1Q8NGN1 323 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 OR6N1Q8NGY5 312 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 OR5J2Q8NH18 312 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 TMEM239Q8WW34 195 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 ERGIC1Q969X5 290 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 TAMM41Q96BW9 452 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 STARD4Q96DR4 205 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 SGTBQ96EQ0 304 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 DNAJA3Q96EY1 480 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 C14orf79Q96F83 325 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 ADGRG7Q96K78 797 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 ARL5BQ96KC2 179 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 ZNF583Q96ND8 569 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 OXGR1Q96P68 337 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 ARHGDIGQ99819 225 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 GPATCH1Q9BRR8 931 aaKnown RBP5.45□□□□□ -1.54
PTCD3-208ENST00000469585 SRXN1Q9BYN0 137 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 ACTR6Q9GZN1 396 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 OPN3Q9H1Y3 402 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-208ENST00000469585 C1orf21Q9H246 121 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 SLCO5A1Q9H2Y9 848 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 ANKRD19PQ9H560 264 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 FKRPQ9H9S5 495 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 FAIMQ9NVQ4 179 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 TAS2R16Q9NYV7 291 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 RIMS3Q9UJD0 308 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 ZNF229Q9UJW7 825 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 POU2F3Q9UKI9 436 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 ADAM18Q9Y3Q7 739 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 ARHGAP21Q5T5U3 1957 aa5.45□□□□□ -1.54
PTCD3-208ENST00000469585 NCKAP5O14513 1909 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 IGKV3D-15A0A087WSY6 115 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 FAM90A10PA6NDY2 464 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 BLOC1S5-TXNDC5H3BN57 136 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 FXYD1O00168 92 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 NME4O00746 187 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 XKRYO14609 159 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 WNT9BO14905 357 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 TIMM23O14925 209 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 SMAD9O15198 467 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 TPST1O60507 370 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 SERPINI2O75830 405 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 TNFSF13O75888 250 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 KRT36O76013 467 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 NDUFB4O95168 129 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 FARS2O95363 451 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 CH25HO95992 272 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 BCL10O95999 233 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 MT-ND1P03886 318 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 H1F0P07305 194 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 PRG2P13727 222 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 PSMB1P20618 241 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 CBLP22681 906 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 DNASE1P24855 282 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 HOXD3P31249 432 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 RPL4P36578 427 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 CAPZA2P47755 286 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 OR1E2P47887 323 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 OR3A2P47893 321 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 NUDT6P53370 316 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 CLDN17P56750 224 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 LINC00205P59089 165 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 PRPS1P60891 318 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 SPIBQ01892 262 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 POU3F1Q03052 451 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 C2orf68Q2NKX9 166 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 BEX5Q5H9J7 111 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 CXorf66Q5JRM2 361 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 FAM205BPQ63HN1 556 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 NIPAL3Q6P499 406 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 TFAP2EQ6VUC0 442 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 OAFQ86UD1 273 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 CCDC36Q8IYA8 594 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 RNF113BQ8IZP6 322 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 C17orf78Q8N4C9 275 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 RNF148Q8N7C7 305 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 RELL2Q8NC24 303 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 OR9K2Q8NGE7 335 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 FNDC8Q8TC99 324 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 TMEM45BQ96B21 275 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 CCDC124Q96CT7 223 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 PYURFQ96I23 114 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 RSRC1Q96IZ7 334 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 RADILQ96JH8 1075 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 WDFY2Q96P53 400 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 FAM110AQ9BQ89 295 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 PSD2Q9BQI7 771 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 THTPAQ9BU02 230 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 HELZ2Q9BYK8 2649 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 MMADHCQ9H3L0 296 aaPredicted RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 COQ10BQ9H8M1 238 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 GORASP2Q9H8Y8 452 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms