RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ID4P47928 161 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 CSNK2A1P68400 391 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-208ENST00000468300 FABP5Q01469 135 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 TP53I3Q53FA7 332 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 TMEM91Q6ZNR0 172 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 FAM109AQ8N4B1 249 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 NOXO1Q8NFA2 376 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 ANGPTL6Q8NI99 470 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 DCUN1D5Q9BTE7 237 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 PTPRZ1P23471 2315 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-208ENST00000468300 PNMA8CA0A1B0GUJ8 204 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF98A6NK75 572 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 CYTIPO60759 359 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 SC5DO75845 299 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 EDNRAP25101 427 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 ACTC1P68032 377 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 ACTA1P68133 377 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 DMKNQ6E0U4 476 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-208ENST00000468300 LINGO2Q7L985 606 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 SIAH3Q8IW03 269 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 UBQLNLQ8IYU4 475 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 SYS1Q8N2H4 156 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 NEIL3Q8TAT5 605 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 TAAR6Q96RI8 345 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 PPIL3Q9H2H8 161 aaKnown RBP7.32□□□□□ -1.24
BRCA1-208ENST00000468300 ACOXLQ9NUZ1 547 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 KCNG2Q9UJ96 466 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 FLVCR1Q9Y5Y0 555 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 SHISA3A0PJX4 238 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 OGG1O15527 345 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 PLPP2O43688 288 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 NOS1APO75052 506 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 SRSF10O75494 262 aaKnown RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 IGHG3P01860 377 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 STAG3L3P0CL85 134 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF43P17038 809 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 UGT2B10P36537 528 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 SELENOPP49908 381 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 CLDN17P56750 224 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 NANOS3P60323 173 aaKnown RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 RPS11P62280 158 aaKnown RBP eCLIP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 C3AR1Q16581 482 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 PYHIN1Q6K0P9 492 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 LRRC69Q6ZNQ3 347 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 DPY19L4Q7Z388 723 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 FJX1Q86VR8 437 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 OTOSQ8NHW6 89 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 MCHR2Q969V1 340 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF837Q96EG3 531 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 WDYHV1Q96HA8 205 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 MAP6Q96JE9 813 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 CLUHP3Q96NS8 147 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 SF3B5Q9BWJ5 86 aaKnown RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 SIAEQ9HAT2 523 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 B4GALT7Q9UBV7 327 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 ANKRD11Q6UB99 2663 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 CENPBD1B2RD01 187 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 J3QLW9 94 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF593O00488 134 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 SLC22A1O15245 554 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 ZNHIT1O43257 154 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 RAB3DO95716 219 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF19P17023 458 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 GABRA5P31644 462 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 CAMLGP49069 296 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 PLEKHG7Q6ZR37 379 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 FOXL2NBQ6ZUU3 175 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 RBMXL3Q8N7X1 1067 aaKnown RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 ST7LQ8TDW4 575 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 ABHD3Q8WU67 409 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 HSD17B8Q92506 261 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 TMEM203Q969S6 136 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 INTS14Q96SY0 518 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 SLIRPQ9GZT3 109 aaKnown RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 DEFB127Q9H1M4 99 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 CHMP1AQ9HD42 196 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 STUB1Q9UNE7 303 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 PCDHGA9Q9Y5G4 932 aaKnown RBP7.31□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF407Q9C0G0 2248 aa7.31□□□□□ -1.24
BRCA1-208ENST00000468300 TRIM77I1YAP6 450 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 SMAD7O15105 426 aaKnown RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 AKAP8O43823 692 aaKnown RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 CRABP1P29762 137 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 EIF1AXP47813 144 aaKnown RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 PLGLB1Q02325 96 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 HSF2Q03933 536 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 DCTN2Q13561 401 aaKnown RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 C1DQ13901 141 aaKnown RBP7.3□□□□□ -1.24
BRCA1-208ENST00000468300 SLC10A1Q14973 349 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 TEX30Q5JUR7 227 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 CARD17Q5XLA6 110 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 SLC22A16Q86VW1 577 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 C20orf196Q8IYI0 205 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 TMEM178AQ8NBL3 297 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 OR10S1Q8NGN2 331 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 RNF128Q8TEB7 428 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 NABP1Q96AH0 204 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 KCNN2Q9H2S1 579 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 RERGLQ9H628 205 aa7.3□□□□□ -1.24
BRCA1-208ENST00000468300 DIABLOQ9NR28 239 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms