RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 WDFY3Q8IZQ1 3526 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 KIAA0100Q14667 2235 aaKnown RBP11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 PRSS44E7EML9 344 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 H0YIZ8 118 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 RENP00797 406 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 HRH1P35367 487 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 SERPINF1P36955 418 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 SNRPEP62304 92 aaKnown RBP11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 NOGQ13253 232 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 UQCC3Q6UW78 93 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 TRAPPC6BQ86SZ2 158 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 SPAG16Q8N0X2 631 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 KDM8Q8N371 416 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 SFT2D1Q8WV19 159 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 PLA2G2FQ9BZM2 168 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 PRMT8Q9NR22 394 aaPredicted RBP11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 EDARQ9UNE0 448 aa11.31□□□□□ -0.6
CLCNKA-204ENST00000464764 FGF16O43320 207 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 HNRNPA1P09651 372 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 HPGDP15428 266 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 PI3P19957 117 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 RAB38P57729 211 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 DCDP81605 110 aaKnown RBP11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 RNASE10Q5GAN6 216 aaKnown RBP11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 WBP2NLQ6ICG8 309 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC29A4Q7RTT9 530 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 ARMC10Q8N2F6 343 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 OR4K17Q8NGC6 315 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF563Q8TA94 476 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 NUBPLQ8TB37 319 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 EDAQ92838 391 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 FOXRED1Q96CU9 486 aaPredicted RBP11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 CNTNAP3BQ96NU0 1288 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 RNF126Q9BV68 326 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 OR10A5Q9H207 317 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 EMC9Q9Y3B6 208 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 TO15178 435 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 STK17BO94768 372 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 PMP2P02689 132 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 CD74P04233 296 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 ACAA1P09110 424 aaPredicted RBP11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 SRSF4Q08170 494 aaKnown RBP11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 AIMP2Q13155 320 aaKnown RBP11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 RUNX3Q13761 415 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 MICBQ29980 383 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 RNF144BQ7Z419 303 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 ZSCAN4Q8NAM6 433 aaPredicted RBP11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 OR2I1PQ8NGU4 316 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 MITD1Q8WV92 249 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 G6PC3Q9BUM1 346 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 CHMP1AQ9HD42 196 aaPredicted RBP11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 UQCC1Q9NVA1 299 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 PRUNE2Q8WUY3 3088 aa11.3□□□□□ -0.6
CLCNKA-204ENST00000464764 ADAP1O75689 374 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 OR6A2O95222 327 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ADH1BP00325 375 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 CELA2BP08218 269 aaPredicted RBP11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 CD79AP11912 226 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 CTLA4P16410 223 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 GNB3P16520 340 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 PSMB6P28072 239 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 PTGFRP43088 359 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ID4P47928 161 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 SWI5Q1ZZU3 235 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 MST1LQ2TV78 715 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 GFOD2Q3B7J2 385 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF679Q8IYX0 411 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 OR1M1Q8NGA1 313 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ASB13Q8WXK3 278 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 PHB2Q99623 299 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 NUDT9Q9BW91 350 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 TCEAL2Q9H3H9 227 aaPredicted RBP11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ACKR4Q9NPB9 350 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 CYTL1Q9NRR1 136 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 CDC14CA4D256 554 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 EFSO43281 561 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 FAM157CP0CG43 387 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 RD3LP0DJH9 198 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 GPR3P46089 330 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 BAP18Q8IXM2 172 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 AVL9Q8NBF6 648 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 MARCH1Q8TCQ1 289 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 RNF128Q8TEB7 428 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 CAPNS2Q96L46 248 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 CKLFQ9UBR5 152 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 LRP12Q9Y561 859 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 CLDN16Q9Y5I7 305 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 TMEM14AQ9Y6G1 99 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 TXNDC12O95881 172 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 CRHP06850 196 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF806P0C7X5 589 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 CCL5P13501 91 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 MUC1P15941 1255 aaPredicted RBP11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 DNASE1L1P49184 302 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 INSM1Q01101 510 aaPredicted RBP11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 SKP2Q13309 424 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 TGIF1Q15583 401 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms