RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CLEC12BQ2HXU8 276 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 ZNF774Q6NX45 483 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 TRUB1Q8WWH5 349 aaKnown RBP14.68□□□□□ -0.06
VPS52-215ENST00000464425 PITX2Q99697 317 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 WACQ9BTA9 647 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 WNT5BQ9H1J7 359 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 VCX3BQ9H321 246 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 C1orf198Q9H425 327 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 PLK3Q9H4B4 646 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 LOC100130705A0A1B0GUX0 176 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 TMEM129A0AVI4 362 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 PRR23D1E9PI22 279 aaPredicted RBP14.67□□□□□ -0.06
VPS52-215ENST00000464425 H7C417 338 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 SSX4O60224 188 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 PRR23D2P0DMB1 279 aaPredicted RBP14.67□□□□□ -0.06
VPS52-215ENST00000464425 SPI1P17947 270 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 GLRXP35754 106 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 GGT2P36268 569 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 GDI2P50395 445 aaKnown RBP14.67□□□□□ -0.06
VPS52-215ENST00000464425 BLVRAP53004 296 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 CDC42P60953 191 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 MEP1BQ16820 701 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 CPOQ8IVL8 374 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 ALDH16A1Q8IZ83 802 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 CIARTQ8N365 385 aaPredicted RBP14.67□□□□□ -0.06
VPS52-215ENST00000464425 C11orf40Q8WZ69 217 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 VRK1Q99986 396 aaPredicted RBP14.67□□□□□ -0.06
VPS52-215ENST00000464425 SYT3Q9BQG1 590 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 BARX1Q9HBU1 254 aaPredicted RBP14.67□□□□□ -0.06
VPS52-215ENST00000464425 DLL4Q9NR61 685 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 FLNAP21333 2647 aaKnown RBP14.67□□□□□ -0.06
VPS52-215ENST00000464425 ARFGEF3Q5TH69 2177 aa14.67□□□□□ -0.06
VPS52-215ENST00000464425 LOC100509620A0A075B734 347 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 C5orf49A4QMS7 147 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 FAM183AA6NL82 134 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 H7C1Q1 480 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 SMAD7O15105 426 aaKnown RBP14.66□□□□□ -0.06
VPS52-215ENST00000464425 PRODHO43272 600 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 TLX2O43763 284 aaPredicted RBP14.66□□□□□ -0.06
VPS52-215ENST00000464425 PRKYO43930 277 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 LY6HO94772 140 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 NUDT6P53370 316 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 UCP2P55851 309 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 LSM6P62312 80 aaKnown RBP14.66□□□□□ -0.06
VPS52-215ENST00000464425 PLBD1Q6P4A8 553 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 SYT9Q86SS6 491 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 LRP11Q86VZ4 500 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 ZCCHC24Q8N2G6 241 aaKnown RBP14.66□□□□□ -0.06
VPS52-215ENST00000464425 TCEANCQ8N8B7 351 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 ZNF555Q8NEP9 628 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 PROKR2Q8NFJ6 384 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 OR8J1Q8NGP2 316 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 OR9Q1Q8NGQ5 310 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 TMEM163Q8TC26 289 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 MRPL24Q96A35 216 aaKnown RBP14.66□□□□□ -0.06
VPS52-215ENST00000464425 POM121L2Q96KW2 1035 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 DOK1Q99704 481 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 HCAR1Q9BXC0 346 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 MRPL37Q9BZE1 423 aaKnown RBP14.66□□□□□ -0.06
VPS52-215ENST00000464425 HINT3Q9NQE9 182 aaKnown RBP14.66□□□□□ -0.06
VPS52-215ENST00000464425 DUSP13Q9UII6 198 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 GMPPBQ9Y5P6 360 aa14.66□□□□□ -0.06
VPS52-215ENST00000464425 LCKP06239 509 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 GAAP10253 952 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 RAD52P43351 418 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 ERVS71-1P61550 626 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 RPS23P62266 143 aaKnown RBP14.65□□□□□ -0.06
VPS52-215ENST00000464425 SCRN3Q0VDG4 424 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 TNK1Q13470 666 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 SLC35D3Q5M8T2 416 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 SLC25A30Q5SVS4 291 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 TTC23Q5W5X9 447 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 CXXC5Q7LFL8 322 aaKnown RBP14.65□□□□□ -0.06
VPS52-215ENST00000464425 DHRSXQ8N5I4 330 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 SLC26A10Q8NG04 563 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 SORCS2Q96PQ0 1159 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 ASH2LQ9UBL3 628 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 POLR1DQ9Y2S0 133 aa14.65□□□□□ -0.06
VPS52-215ENST00000464425 H0YAE9 185 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 GLCEO94923 617 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 HLA-DQA2P01906 255 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 TFP02787 698 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 ADRA2AP08913 450 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 CLUP10909 449 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 SLC2A5P22732 501 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 PCSK6P29122 969 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 PYCR1P32322 319 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 WNT5AP41221 380 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 EFNA4P52798 201 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 SNRPGP62308 76 aaKnown RBP14.64□□□□□ -0.07
VPS52-215ENST00000464425 ADARB1P78563 741 aaKnown RBP14.64□□□□□ -0.07
VPS52-215ENST00000464425 TEKQ02763 1124 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 AQP6Q13520 282 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 LINC01590Q5TEZ4 76 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 AADACL4Q5VUY2 407 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 NXNL2Q5VZ03 156 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 RGS7BPQ6MZT1 257 aaPredicted RBP14.64□□□□□ -0.07
VPS52-215ENST00000464425 FAM81AQ8TBF8 368 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 ZNRF4Q8WWF5 429 aa14.64□□□□□ -0.07
VPS52-215ENST00000464425 OTULINQ96BN8 352 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms