RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 TVP23BQ9NYZ1 205 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 EIF3KQ9UBQ5 218 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 GDF2Q9UK05 429 aaPredicted RBP13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 POLR1DQ9Y2S0 133 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PMF1-BGLAPU3KQ54 211 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CELSR1Q9NYQ6 3014 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 MAP1AP78559 2803 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ANKRD65E5RJM6 399 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 GLCEO94923 617 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 NGFP01138 241 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ALPLP05186 524 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PSKH1P11801 424 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 BMP4P12644 408 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ZNF250P15622 560 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PAICSP22234 425 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 HTR5AP47898 357 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 BLVRAP53004 296 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ERVS71-1P61550 626 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 RPS23P62266 143 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 RAB35Q15286 201 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SNAPC1Q16533 368 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 TEX30Q5JUR7 227 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ELFN2Q5R3F8 820 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SLX4IPQ5VYV7 408 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 RGS7BPQ6MZT1 257 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PLBD1Q6P4A8 553 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CPOQ8IVL8 374 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PQLC1Q8N2U9 271 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 WFDC11Q8NEX6 87 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OR2AJ1Q8NGZ0 328 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SLC7A6Q92536 515 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OTULINQ96BN8 352 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 MAP6Q96JE9 813 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 TEX12Q9BXU0 123 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 BCL2L14Q9BZR8 327 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OR51V1Q9H2C8 321 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 MARCH7Q9H992 704 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PNRC2Q9NPJ4 139 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 USE1Q9NZ43 259 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ATPIF1Q9UII2 106 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 COMMD3-BMI1R4GMX3 469 aa13.24□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ZNF593O00488 134 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PRKYO43930 277 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 IGHV4-39P01824 125 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 LCKP06239 509 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 DBHP09172 617 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 RPS27P42677 84 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ENTPD1P49961 510 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SNRPD2P62316 118 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 KRTAP27-1Q3LI81 207 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 Q5PR19 223 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 C12orf73Q69YU5 71 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 TGIF2LYQ8IUE0 185 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 C1orf174Q8IYL3 243 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 BBS1Q8NFJ9 593 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OR1J1Q8NGS3 322 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OR6K6Q8NGW6 343 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 MARS2Q96GW9 593 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PLEKHA8Q96JA3 519 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 COQ7Q99807 217 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 GABARAPL3Q9BY60 117 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 HDHD2Q9H0R4 259 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ELOVL3Q9HB03 270 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 TBCCD1Q9NVR7 557 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 MYEF2Q9P2K5 600 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ENOPH1Q9UHY7 261 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 FZR1Q9UM11 496 aa13.23□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ITPR3Q14573 2671 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 IGLV3-9A0A075B6K5 115 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 EI24O14681 340 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PRODHO43272 600 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CLPTM1O96005 669 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SLC2A5P22732 501 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 GSTT1P30711 240 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 TMEM154Q6P9G4 183 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ARL9Q6T311 187 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 UNQ6126/PRO20091Q6UXV3 157 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 RFPL4BQ6ZWI9 263 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CXXC5Q7LFL8 322 aaKnown RBP13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 TIGD4Q8IY51 512 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CBR4Q8N4T8 237 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OR10S1Q8NGN2 331 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SYNPRQ8TBG9 265 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 DCLRE1CQ96SD1 692 aaKnown RBP13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PITX2Q99697 317 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SLC29A1Q99808 456 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SYT3Q9BQG1 590 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 DUSP13Q9UII6 198 aa13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 FBXO9Q9UK97 447 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ZNF469Q96JG9 3925 aaPredicted RBP13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 E9PQ18 207 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 BAG2O95816 211 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ABHD16AO95870 558 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PPOXP50336 477 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ALDH3A2P51648 485 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PPP1CBP62140 327 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ECH1Q13011 328 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SLC35D3Q5M8T2 416 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 DNM1P46Q6ZS02 220 aa13.21□□□□□ -0.29
RAB11FIP3-208ENST00000464263 DCXRQ7Z4W1 244 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms