RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 UGT2B15P54855 530 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 ERVK-25P63136 954 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 COL10A1Q03692 680 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 FMODQ06828 376 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 BST1Q10588 318 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 FADDQ13158 208 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 NPTX1Q15818 432 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 FAM201AQ5SY85 155 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 ARMC4Q5T2S8 1044 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 FAM27BQ5VT28 67 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 DHRS7BQ6IAN0 325 aaPredicted RBP6.35□□□□□ -1.39
SMC3-202ENST00000462899 SLC25A47Q6Q0C1 308 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 LYPD2Q6UXB3 125 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 DCDC5Q6ZRR9 648 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 MSANTD1Q6ZTZ1 278 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 NPEPL1Q8NDH3 523 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 WWC2-AS2Q96NR7 200 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 WDFY2Q96P53 400 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 PCGF1Q9BSM1 259 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 NUF2Q9BZD4 464 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 ELOVL3Q9HB03 270 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 TUBG2Q9NRH3 451 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 TBCCD1Q9NVR7 557 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 EIF3KQ9UBQ5 218 aaKnown RBP6.35□□□□□ -1.39
SMC3-202ENST00000462899 CLN8Q9UBY8 286 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 ZNF229Q9UJW7 825 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 RAP2CQ9Y3L5 183 aa6.35□□□□□ -1.39
SMC3-202ENST00000462899 NPIPB13A6NJU9 1138 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 NPIPB4C9JG80 1138 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 SURF4O15260 269 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 RNF13O43567 381 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 FMO6PO60774 539 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 SPAG7O75391 227 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 TOX4O94842 621 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 CH25HO95992 272 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 IL6P05231 212 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 CST2P09228 141 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 ACADSP16219 412 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 SLC6A2P23975 617 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 EPHA3P29320 983 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 NPY4RP50391 375 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 RPL14P50914 215 aaKnown RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 PCBP3P57721 371 aaKnown RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 RGS8P57771 180 aaPredicted RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 CLRN1P58418 232 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 ABCE1P61221 599 aaKnown RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 RPL18Q07020 188 aaKnown RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 ENDOGQ14249 297 aaKnown RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 TAF11Q15544 211 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 TTMPQ5BVD1 217 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 FOXB2Q5VYV0 432 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 ZNF613Q6PF04 617 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 CCBE1Q6UXH8 406 aaPredicted RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 NLRC3Q7RTR2 1065 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 HDXQ7Z353 690 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 MSRB3Q8IXL7 192 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 IFT20Q8IY31 132 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 GALNT4Q8N4A0 578 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 OR10AD1Q8NGE0 317 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 Q8TCH9 128 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 LRTOMTQ8WZ04 291 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 HDAC2Q92769 488 aaKnown RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 HAVCR1Q96D42 359 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 PKNOX2Q96KN3 472 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 TRIM15Q9C019 465 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 PAIP1Q9H074 479 aaKnown RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 DPAGT1Q9H3H5 408 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 TOR3AQ9H497 397 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 GRPEL1Q9HAV7 217 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 CACYBPQ9HB71 228 aaKnown RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 TMEM27Q9HBJ8 222 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 SMURF1Q9HCE7 757 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 CCNB1IP1Q9NPC3 277 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 MEPEQ9NQ76 525 aaPredicted RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 NANSQ9NR45 359 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 LGALS13Q9UHV8 139 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.34□□□□□ -1.39
SMC3-202ENST00000462899 GMEB1Q9Y692 573 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 USH1CQ9Y6N9 552 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 U3KQE9 123 aa6.34□□□□□ -1.39
SMC3-202ENST00000462899 TMEM247A6NEH6 219 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 RNASEK-C17orf49H0YIS7 233 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 XPNPEP2O43895 674 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 OR6A2O95222 327 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 ABHD16AO95870 558 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 SERPINE1P05121 402 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 SCG5P05408 212 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 LIPFP07098 398 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 COX5BP10606 129 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 GSTM3P21266 225 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 LAP3P28838 519 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 TGFBR2P37173 567 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 ARHGDIAP52565 204 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 RAD23AP54725 363 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 NCALDP61601 193 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 HOXA4Q00056 320 aaPredicted RBP6.33□□□□□ -1.4
SMC3-202ENST00000462899 CLEC12AQ5QGZ9 265 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 HHATQ5VTY9 493 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 NXNQ6DKJ4 435 aa6.33□□□□□ -1.4
SMC3-202ENST00000462899 SLC35E4Q6ICL7 350 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms