RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 D2HGDHQ8N465 521 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 SPSB2Q99619 263 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 GPR61Q9BZJ8 451 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 NRSN2Q9GZP1 204 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 GDF2Q9UK05 429 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 ZMIZ1Q9ULJ6 1067 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 MSRB2Q9Y3D2 182 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 CEP295Q9C0D2 2601 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 FAM157AC9JC47 383 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 SOCS6O14544 535 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 XRCC3O43542 346 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 FARS2O95363 451 aaKnown RBP10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 MBP02144 154 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 CASP9P55211 416 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 ACTA2P62736 377 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 ACTG2P63267 376 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 GABREP78334 506 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 RPS26P11Q5JNZ5 115 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 LIPNQ5VXI9 398 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 FIGLAQ6QHK4 219 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 CD163Q86VB7 1156 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 THOC6Q86W42 341 aaKnown RBP10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 TMEM99Q8N816 258 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 OR9A4Q8NGU2 314 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 WDR34Q96EX3 536 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 MARS2Q96GW9 593 aaKnown RBP10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 LAT2Q9GZY6 243 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 CXorf36Q9H7Y0 433 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 CUTCQ9NTM9 273 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 KCNE5Q9UJ90 142 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 ZNF337Q9Y3M9 751 aa10.35□□□□□ -0.75
TRAPPC3-205ENST00000462715 UNC119BA6NIH7 251 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 ETHE1O95571 254 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 LINC00614P0C842 121 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 CLN3Q13286 438 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 CDK5R1Q15078 307 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 SYPL1Q16563 259 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 TMEM164Q5U3C3 297 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 MED27Q6P2C8 311 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 MTFR2Q6P444 385 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 SSX6Q7RTT6 188 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 MRPL52Q86TS9 123 aaKnown RBP10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 NUDT13Q86X67 352 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 TGIF2LXQ8IUE1 241 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 GALNT16Q8N428 558 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 OR1J1Q8NGS3 322 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 OR5AK3PQ8NH89 298 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 SYNPRQ8TBG9 265 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 SNX33Q8WV41 574 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 MISP3Q96FF7 219 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 RHOVQ96L33 236 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 LRFN5Q96NI6 719 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 RSPO3Q9BXY4 272 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 POTEKPQ9BYX7 375 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 EXO5Q9H790 373 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 RPS10P5Q9NQ39 176 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 SIDT1Q9NXL6 827 aaKnown RBP10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 VSX1Q9NZR4 365 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 HMGN4O00479 90 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 FCGR3AP08637 254 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 NPPBP16860 134 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 SRMP19623 302 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 SPINK2P20155 84 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 TBXA2RP21731 343 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 GSK3AP49840 483 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 PRKXP51817 358 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 IL11RAQ14626 422 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 MLC1Q15049 377 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 PCGF3Q3KNV8 242 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 FCRLAQ7L513 359 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 RNF175Q8N4F7 328 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 OR5T3Q8NGG3 340 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 OR13D1Q8NGV5 346 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 SNIP1Q8TAD8 396 aaKnown RBP10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 ADAMTS17Q8TE56 1095 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 WNT2BQ93097 391 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 OR6C1Q96RD1 312 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 PARP11Q9NR21 331 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 OCIAD1Q9NX40 245 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 AK6Q9Y3D8 172 aaKnown RBP10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 V9GY05 133 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 CCDC88CQ9P219 2028 aa10.34□□□□□ -0.75
TRAPPC3-205ENST00000462715 NCOR2Q9Y618 2525 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 C7orf77A4D0Y5 90 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 TVP23AA6NH52 213 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 STMND1H3BQB6 276 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 HEXBP07686 556 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 CCL4P13236 92 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 CDK2P24941 298 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 MPZP25189 248 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 CFPP27918 469 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 FRKP42685 505 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 CASP6P55212 293 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 HSD17B7P56937 341 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 COTL1Q14019 142 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 RBM39Q14498 530 aaKnown RBP10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 RTP5Q14D33 572 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 DCAF12Q5T6F0 453 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 ALKBH2Q6NS38 261 aa10.33□□□□□ -0.76
TRAPPC3-205ENST00000462715 IGF2-ASQ6U949 168 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms