RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 PLPP2O43688 288 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 B3GALT2O43825 422 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GSTP1P09211 210 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 LAMP1P11279 417 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 FABP2P12104 132 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MMP9P14780 707 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SHC1P29353 583 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MPGP29372 298 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SGSHP51688 502 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 KRTDAPP60985 99 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 HABP2Q14520 560 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 POU2AF1Q16633 256 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 IAH1Q2TAA2 248 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 SLC36A2Q495M3 483 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TMEM128Q5BJH2 165 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SPIN3Q5JUX0 258 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PRAMEF14Q5SWL7 426 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 RPL7L1Q6DKI1 246 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 TXNRD3NBQ6F5E7 133 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 LAMTOR1Q6IAA8 161 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 JMJD6Q6NYC1 403 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 HTR3DQ70Z44 454 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ERN2Q76MJ5 926 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 ERASQ7Z444 233 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CPOQ8IVL8 374 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PNKDQ8N490 385 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 C2orf69Q8N8R5 385 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR51Q1Q8NH59 317 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 THEM6Q8WUY1 208 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TOMM40LQ969M1 308 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 RERGQ96A58 199 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 C14orf144Q96I85 54 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 BOD1Q96IK1 185 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GJD4Q96KN9 370 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 MRGPRX2Q96LB1 330 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PSMG3Q9BT73 122 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 RSRP1Q9BUV0 290 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CHST5Q9GZS9 411 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ZBP1Q9H171 429 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 C1orf198Q9H425 327 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TMEM231Q9H6L2 316 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PPP1R3EQ9H7J1 279 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MTHFD2LQ9H903 347 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 FBXO34Q9NWN3 711 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 KLHL13Q9P2N7 655 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 LHX3Q9UBR4 397 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 WIPI2Q9Y4P8 454 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 WSB1Q9Y6I7 421 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PATJQ8NI35 1801 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SIPA1L3O60292 1781 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 WTIPA6NIX2 430 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 PIRO00625 290 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PQBP1O60828 265 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 LRP3O75074 770 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SFT2D2O95562 160 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 HAND1O96004 215 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MAS1P04201 325 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SERPINE2P07093 398 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GUSBP08236 651 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR4Q2P0C623 313 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CTSEP14091 401 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ZNF43P17038 809 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 INSM1Q01101 510 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 ZNF90Q03938 601 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TLE1Q04724 770 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 EGR3Q06889 387 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TMEM267Q0VDI3 215 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 PPP1R8Q12972 351 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 IL24Q13007 206 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SGCGQ13326 291 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 IL10RAQ13651 578 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SPATA45Q537H7 98 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 BEX5Q5H9J7 111 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PRSS36Q5K4E3 855 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CYHR1Q6ZMK1 362 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 VASH2Q86V25 355 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 WDR5BQ86VZ2 330 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 KMT5CQ86Y97 462 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CMTM4Q8IZR5 234 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CFAP52Q8N1V2 620 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SLC22A24Q8N4F4 322 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ARHGEF39Q8N4T4 335 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR2T10Q8NGZ9 312 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR5K2Q8NHB8 316 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ZNF563Q8TA94 476 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 KCNG3Q8TAE7 436 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 HMGCLL1Q8TB92 370 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 RNASEH2CQ8TDP1 164 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 TMEM234Q8WY98 164 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 STARD4Q96DR4 205 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TCTN2Q96GX1 697 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ZNF681Q96N22 645 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 NSUN5Q96P11 429 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 TBX15Q96SF7 602 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SIGMAR1Q99720 223 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TMEM204Q9BSN7 226 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TPPP3Q9BW30 176 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SEMA6CQ9H3T2 930 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 KIAA1456Q9P272 454 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PRODH2Q9UF12 536 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms