RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PLXDC2Q6UX71 529 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 NAA40Q86UY6 237 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 ZNF227Q86WZ6 799 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 CATSPERDQ86XM0 798 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 C9orf62Q8N4C0 152 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 ACBD4Q8NC06 268 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 FGGYQ96C11 551 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 CHST6Q9GZX3 395 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 G6PC2Q9NQR9 355 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 SLC5A6Q9Y289 635 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 EXPH5Q8NEV8 1989 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 MYO7BQ6PIF6 2116 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 PYCARD-AS1I3L0S3 204 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 M0QYG6 137 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 RER1O15258 196 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 SLC22A5O76082 557 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 CD1AP06126 327 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 GNALP38405 381 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 RASGEF1BQ0VAM2 473 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 BTN2A1Q7KYR7 527 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.19□□□□□ -0.3
SF1-211ENST00000448404 MAML2Q8IZL2 1156 aaPredicted RBP13.19□□□□□ -0.3
SF1-211ENST00000448404 DEFB123Q8N688 67 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 GALNT11Q8NCW6 608 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 OR4D6Q8NGJ1 314 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 NOX3Q9HBY0 568 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 ZNF69Q9UC07 566 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 OR52A1Q9UKL2 312 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 DSPP15924 2871 aaKnown RBP13.18□□□□□ -0.3
SF1-211ENST00000448404 GLSO94925 669 aaPredicted RBP13.18□□□□□ -0.3
SF1-211ENST00000448404 PRKACAP17612 351 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 PSMB1P20618 241 aaKnown RBP13.18□□□□□ -0.3
SF1-211ENST00000448404 MAPK3P27361 379 aaPredicted RBP13.18□□□□□ -0.3
SF1-211ENST00000448404 BTG1P62324 171 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 TOMM20Q15388 145 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 CSRP2Q16527 193 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 TEX30Q5JUR7 227 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 DTX1Q86Y01 620 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 OR4C16Q8NGL9 310 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 NUBPLQ8TB37 319 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 STK35Q8TDR2 534 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 UCN2Q96RP3 112 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 DUSP23Q9BVJ7 150 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 ZNF319Q9P2F9 582 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 POLR1DQ9Y2S0 133 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 A0A0G2JMM0 328 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 A0A1W2PPB8 328 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 A0A1W2PRS3 328 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 KIR3DP1A8MWS1 328 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 CD3DP04234 171 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 RLN1P04808 185 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 TMEM65Q6PI78 240 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 CARFQ8N187 725 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 OR4S1Q8NGB4 309 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 ZNF431Q8TF32 576 aaPredicted RBP13.18□□□□□ -0.3
SF1-211ENST00000448404 ADAT3Q96EY9 351 aaPredicted RBP13.18□□□□□ -0.3
SF1-211ENST00000448404 ASH2LQ9UBL3 628 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 CACNA1HO95180 2353 aa13.18□□□□□ -0.3
SF1-211ENST00000448404 COL5A1P20908 1838 aaPredicted RBP13.17□□□□□ -0.3
SF1-211ENST00000448404 GGT3PA6NGU5 568 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 E9PLN8 166 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 GSTZ1O43708 216 aaPredicted RBP13.17□□□□□ -0.3
SF1-211ENST00000448404 KCTD18Q6PI47 426 aaPredicted RBP13.17□□□□□ -0.3
SF1-211ENST00000448404 C17orf107Q6ZR85 190 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 COMMD2Q86X83 199 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.17□□□□□ -0.3
SF1-211ENST00000448404 TMEM105Q8N8V8 129 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 OR2T35Q8NGX2 323 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 MFSD8Q8NHS3 518 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 DDIT4LQ96D03 193 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 SPACA9Q96E40 222 aaPredicted RBP13.17□□□□□ -0.3
SF1-211ENST00000448404 ZNF160Q9HCG1 818 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 CHCHD2Q9Y6H1 151 aaPredicted RBP13.17□□□□□ -0.3
SF1-211ENST00000448404 DOCK7Q96N67 2140 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 ANKRD20A5PA0PJZ0 165 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 H2BFMP0C1H6 154 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 ABOP16442 354 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 APOBEC1P41238 236 aaKnown RBP13.17□□□□□ -0.3
SF1-211ENST00000448404 DNASE1L1P49184 302 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 GPR85P60893 370 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 MFSD13AQ14CX5 517 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 PCOLCEQ15113 449 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 RAB11BQ15907 218 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
SF1-211ENST00000448404 ZNF680Q8NEM1 530 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 OR2M3Q8NG83 312 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 OR4K17Q8NGC6 315 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 OR52N4Q8NGI2 321 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 OR51S1Q8NGJ8 323 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 ST8SIA1Q92185 356 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 SLAMF6Q96DU3 332 aa13.17□□□□□ -0.3
SF1-211ENST00000448404 A0A1W2PPC1 479 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 TMEM235A6NFC5 223 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 D6RAR5 112 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 PEX14O75381 377 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 SRSF10O75494 262 aaKnown RBP13.16□□□□□ -0.3
SF1-211ENST00000448404 KLF7O75840 302 aaPredicted RBP13.16□□□□□ -0.3
SF1-211ENST00000448404 HRGP04196 525 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 VSIG10L2P0DP72 767 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 CALCBP10092 127 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms