RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 ATF6BQ99941 703 aa11.46□□□□□ -0.57
TIMP1-204ENST00000445623 WNT5BQ9H1J7 359 aa11.46□□□□□ -0.57
TIMP1-204ENST00000445623 CDH20Q9HBT6 801 aa11.46□□□□□ -0.57
TIMP1-204ENST00000445623 NOX3Q9HBY0 568 aa11.46□□□□□ -0.57
TIMP1-204ENST00000445623 INPP5EQ9NRR6 644 aa11.46□□□□□ -0.57
TIMP1-204ENST00000445623 CNOT2Q9NZN8 540 aaKnown RBP11.46□□□□□ -0.57
TIMP1-204ENST00000445623 EXOGQ9Y2C4 368 aaKnown RBP11.46□□□□□ -0.57
TIMP1-204ENST00000445623 TPRKBQ9Y3C4 175 aa11.46□□□□□ -0.57
TIMP1-204ENST00000445623 LRRK2Q5S007 2527 aa11.46□□□□□ -0.58
TIMP1-204ENST00000445623 ANKHD1Q8IWZ3 2542 aaKnown RBP11.46□□□□□ -0.58
TIMP1-204ENST00000445623 IGHV1-18A0A0C4DH31 117 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 DAPL1A0PJW8 107 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 SLC1A7O00341 560 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 APOL3O95236 402 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 CRYAAP02489 173 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 CCDC159P0C7I6 412 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 CECR9P0C854 216 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 PIPP12273 146 aaPredicted RBP11.45□□□□□ -0.58
TIMP1-204ENST00000445623 ALOX5APP20292 161 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 CD40P25942 277 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 STOMP27105 288 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 DCKP27707 260 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 GRB2P62993 217 aaKnown RBP11.45□□□□□ -0.58
TIMP1-204ENST00000445623 CCDC92Q53HC0 331 aaPredicted RBP11.45□□□□□ -0.58
TIMP1-204ENST00000445623 RBM48Q5RL73 367 aaKnown RBP11.45□□□□□ -0.58
TIMP1-204ENST00000445623 SP5Q6BEB4 398 aaPredicted RBP11.45□□□□□ -0.58
TIMP1-204ENST00000445623 SEZ6L2Q6UXD5 910 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.45□□□□□ -0.58
TIMP1-204ENST00000445623 ZNF786Q8N393 782 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 ACBD7Q8N6N7 88 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 ZNF540Q8NDQ6 660 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 ST7LQ8TDW4 575 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 RNF133Q8WVZ7 376 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 SPTSSAQ969W0 71 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 SLAMF6Q96DU3 332 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 MAP6Q96JE9 813 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 ZNF75AQ96N20 296 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 PSMG3-AS1Q96PY0 264 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 COPS4Q9BT78 406 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 ABHD6Q9BV23 337 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 MROQ9BYG7 248 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 CENPMQ9NSP4 180 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 DDX28Q9NUL7 540 aaKnown RBP11.45□□□□□ -0.58
TIMP1-204ENST00000445623 CHCHD3Q9NX63 227 aaKnown RBP11.45□□□□□ -0.58
TIMP1-204ENST00000445623 NPAP1Q9NZP6 1156 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 LRRC42Q9Y546 428 aa11.45□□□□□ -0.58
TIMP1-204ENST00000445623 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.44□□□□□ -0.58
TIMP1-204ENST00000445623 SYNGR3O43761 229 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 XPNPEP2O43895 674 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 APOC1P02654 83 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 CD3EP07766 207 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 H2BFMP0C1H6 154 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 PSKH1P11801 424 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 MYL12AP19105 171 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 APEX1P27695 318 aaKnown RBP11.44□□□□□ -0.58
TIMP1-204ENST00000445623 HSD11B1P28845 292 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 GALK2Q01415 458 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 NAAAQ02083 359 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 EGR3Q06889 387 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 DAZAP2Q15038 168 aaPredicted RBP11.44□□□□□ -0.58
TIMP1-204ENST00000445623 NCMAPQ5T1S8 102 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 LAIR2Q6ISS4 152 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 DEGS2Q6QHC5 323 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 ARL9Q6T311 187 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 UNQ6126/PRO20091Q6UXV3 157 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 AHSA2Q719I0 299 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 KRT77Q7Z794 578 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 ZNF584Q8IVC4 421 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 STX19Q8N4C7 294 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 CPEB3Q8NE35 698 aaKnown RBP11.44□□□□□ -0.58
TIMP1-204ENST00000445623 OR52I1Q8NGK6 324 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 SNX33Q8WV41 574 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 MYDGFQ969H8 173 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 PLPPR2Q96GM1 343 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 TMEM80Q96HE8 168 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 RADILQ96JH8 1075 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 DCLRE1CQ96SD1 692 aaKnown RBP11.44□□□□□ -0.58
TIMP1-204ENST00000445623 TBX5Q99593 518 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 NIPAL2Q9H841 368 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 FGF20Q9NP95 211 aaPredicted RBP11.44□□□□□ -0.58
TIMP1-204ENST00000445623 PSORS1C1Q9UIG5 152 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 COPS3Q9UNS2 423 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 SPEF1Q9Y4P9 236 aa11.44□□□□□ -0.58
TIMP1-204ENST00000445623 A0A1W2PQL4 384 aaPredicted RBP11.43□□□□□ -0.58
TIMP1-204ENST00000445623 C5orf49A4QMS7 147 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 ZNF254O75437 659 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 IGHA1P01876 353 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 KRT8P05787 483 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 CELA3BP08861 270 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 CCNOP22674 350 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 HCCSP53701 268 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 TPTEP56180 551 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 ACTA2P62736 377 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 ACTG2P63267 376 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 BSPH1Q075Z2 132 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 ZNF322Q6U7Q0 402 aaPredicted RBP11.43□□□□□ -0.58
TIMP1-204ENST00000445623 SPATC1Q76KD6 591 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 FAM220AQ7Z4H9 259 aa11.43□□□□□ -0.58
TIMP1-204ENST00000445623 ZNF679Q8IYX0 411 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms