RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 GLYR1Q49A26 553 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CPZQ66K79 652 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CPEB2Q7Z5Q1 589 aaKnown RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 BPIFA4PQ86YQ2 179 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 IGDCC3Q8IVU1 814 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 IL22RA1Q8N6P7 574 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 RNF133Q8WVZ7 376 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 SLAMF6Q96DU3 332 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 MARS2Q96GW9 593 aaKnown RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 HSPB9Q9BQS6 159 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CDCA4Q9BXL8 241 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CPEB1Q9BZB8 566 aaKnown RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 SLC39A8Q9C0K1 460 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 KATNBL1Q9H079 304 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ST6GALNAC4Q9H4F1 302 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 RAB9BQ9NP90 201 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 DCP1AQ9NPI6 582 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 NDUFB11Q9NX14 153 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 MARCH4Q9P2E8 410 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 LHX3Q9UBR4 397 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 BACE2Q9Y5Z0 518 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 PCF11O94913 1555 aaKnown RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 KIAA0586Q9BVV6 1533 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 COLCA2A8K830 154 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CEBPZOSA8MTT3 80 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 SNAI1O95863 264 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CATP04040 527 aaKnown RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CA3P07451 260 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 OR4A8P0C604 315 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 IQCF3P0C7M6 154 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 FOLR1P15328 257 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 AZU1P20160 251 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ZBTB25P24278 435 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 PYCR1P32322 319 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 PMELP40967 661 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 VIPR2P41587 438 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CLDN18P56856 261 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 MMDQ15546 238 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 TGIF1Q15583 401 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 PMCHL1Q16048 86 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 BSXQ3C1V8 233 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 PHF13Q86YI8 300 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 C10orf126Q8N4M7 172 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CYP2W1Q8TAV3 490 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 DCAF4Q8WV16 495 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 NSUN4Q96CB9 384 aaKnown RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ARSGQ96EG1 525 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ZNF764Q96H86 408 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 SMIM7Q9BQ49 75 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ELL3Q9HB65 397 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CYSLTR2Q9NS75 346 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 B3GAT1Q9P2W7 334 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ZNF214Q9UL59 606 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 HSF4Q9ULV5 492 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 DUOX2Q9NRD8 1548 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ZNF878C9JN71 531 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 M0R082 166 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 WNT9AO14904 365 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 DEGS1O15121 323 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CA2P00918 260 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 SNRPBP14678 240 aaKnown RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 DAPP51397 102 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 PPP1CBP62140 327 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 SEMG2Q02383 582 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 IQGAP2Q13576 1575 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 MSMO1Q15800 293 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 PRTGQ2VWP7 1150 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 NHLRC1Q6VVB1 395 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 SAMD7Q7Z3H4 446 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 BIVMQ86UB2 503 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CALHM1Q8IU99 346 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 SUMF1Q8NBK3 374 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ORAI1Q96D31 301 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ZNF341Q9BYN7 854 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 NIF3L1Q9GZT8 377 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 BANF2Q9H503 90 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 TBC1D3DA0A087WVF3 549 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 TBC1D3IA0A087WXS9 549 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 TBC1D3EA0A087X179 549 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 TBC1D3LB9A6J9 549 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 PCDH7O60245 1069 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 HBP1O60381 514 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 SLCO2B1O94956 709 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 KNG1P01042 644 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 APOBEC3AP31941 199 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 BRS3P32247 399 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 PBX2P40425 430 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 CX3CR1P49238 355 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ELLP55199 621 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 SLC37A1P57057 533 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 RAB38P57729 211 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ZNF90Q03938 601 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 ZNF74Q16587 644 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 PGGHGQ32M88 737 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 WSCD1Q658N2 575 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 TBC1D3CQ6IPX1 549 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 GDF6Q6KF10 455 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-209ENST00000442510 MOB3CQ70IA8 216 aa5.11□□□□□ -1.59
PTPRC-209ENST00000442510 TAS1R1Q7RTX1 841 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms