RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ZNF649Q9BS31 505 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 BARHL1Q9BZE3 327 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 HOXD1Q9GZZ0 328 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 CHRNA10Q9GZZ6 450 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 TPK1Q9H3S4 243 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 PPP1R3EQ9H7J1 279 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 TBC1D17Q9HA65 648 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 POLE4Q9NR33 117 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 INPP5EQ9NRR6 644 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 BABAM2Q9NXR7 383 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 PRODH2Q9UF12 536 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 EPHA6Q9UF33 1036 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 IL20RAQ9UHF4 553 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SIGLEC7Q9Y286 467 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC35A3Q9Y2D2 325 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 CAB39Q9Y376 341 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 CSNK1G3Q9Y6M4 447 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 PCM1Q15154 2024 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 CROCCQ5TZA2 2017 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ATG2AQ2TAZ0 1938 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 A0A1W2PQL4 384 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 DAPL1A0PJW8 107 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 FABP12A6NFH5 140 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TLCD2A6NGC4 264 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SERINC4A6NH21 518 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 FAM183AA6NL82 134 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 EFCAB7A8K855 629 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 C12orf71A8MTZ7 269 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 NPIPB9F8W1W9 429 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 BOLA2-SMG1P6H3BVE0 249 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TRIM77I1YAP6 450 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 M0QZ24 198 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 GABRPO00591 440 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CASKO14936 926 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 AQP9O43315 295 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF749O43361 778 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 RNF13O43567 381 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 PLPP2O43688 288 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 REM1O75628 298 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CDC123O75794 336 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 NDUFB4O95168 129 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 NDUFB2O95178 105 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 LALBAP00709 142 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CSTAP01040 98 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SBK2P0C263 348 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SPNP16150 400 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF3P17036 446 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 FUT1P19526 365 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CELP19835 753 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 PTNP21246 168 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TBXA2RP21731 343 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 GALP22466 123 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CFL1P23528 166 aaKnown RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 F8A1P23610 371 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 PTBP1P26599 531 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CD1CP29017 333 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 SDC2P34741 201 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CD79BP40259 229 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 EIF2S3P41091 472 aaKnown RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 DLX5P56178 289 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 FXYD6P3P58550 94 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TAS2R43P59537 309 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 PPP3R1P63098 170 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ACTC1P68032 377 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ACTA1P68133 377 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 FABP5Q01469 135 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 MXD1Q05195 221 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 RBPJQ06330 500 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 LGALS3BPQ08380 585 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 MZT1Q08AG7 82 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 FUT7Q11130 342 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TRAM1Q15629 374 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF791Q3KP31 576 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 C2orf76Q3KRA6 126 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 C14orf28Q4W4Y0 310 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 KLHL12Q53G59 568 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 DDI2Q5TDH0 399 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 NSUN5P2Q63ZY6 315 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 LCN10Q6JVE6 187 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 NIPAL3Q6P499 406 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ARHGAP11AQ6P4F7 1023 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CD200R1LQ6Q8B3 271 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF322Q6U7Q0 402 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 FAM131AQ6UXB0 335 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CCBE1Q6UXH8 406 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 UNQ6126/PRO20091Q6UXV3 157 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 NPSR1Q6W5P4 371 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 WDR88Q6ZMY6 472 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 DPY19L2P2Q6ZN68 376 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 OAFQ86UD1 273 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 MARCH9Q86YJ5 346 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 LAX1Q8IWV1 398 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TUSC5Q8IXB3 177 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 GPALPP1Q8IXQ4 340 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF440Q8IYI8 595 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 CADM2Q8N3J6 435 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ARIH2OSQ8N7S6 290 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM99Q8N816 258 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 BCORP1Q8N888 145 aa3.04□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZFP41Q8N8Y5 198 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms