RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PTP4A1Q93096 173 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 C4orf45Q96LM5 186 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 MRPL37Q9BZE1 423 aaKnown RBP10.17□□□□□ -0.78
HSPG2-206ENST00000439717 TUBG2Q9NRH3 451 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 TBCCD1Q9NVR7 557 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 TMEFF2Q9UIK5 374 aaPredicted RBP10.17□□□□□ -0.78
HSPG2-206ENST00000439717 GDF2Q9UK05 429 aaPredicted RBP10.17□□□□□ -0.78
HSPG2-206ENST00000439717 CCDC168Q8NDH2 2452 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 MYO9AB2RTY4 2548 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 VPS13CQ709C8 3753 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 TVP23AA6NH52 213 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 ZAR1LA6NP61 321 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 H3BSA7 217 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 J3QW42 95 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 PRODHO43272 600 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 MITFO75030 526 aaPredicted RBP10.16□□□□□ -0.78
HSPG2-206ENST00000439717 LCKP06239 509 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 CLUP10909 449 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 RGS6P49758 472 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 ENTPD1P49961 510 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 DBPQ10586 325 aaPredicted RBP10.16□□□□□ -0.78
HSPG2-206ENST00000439717 SNAPC1Q16533 368 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 MSMPQ1L6U9 139 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 SLC35D3Q5M8T2 416 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 SLX4IPQ5VYV7 408 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 PLBD1Q6P4A8 553 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 CORO6Q6QEF8 472 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 LINC00346Q8IVM7 164 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 PQLC1Q8N2U9 271 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 OR1J1Q8NGS3 322 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 OR6K6Q8NGW6 343 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 SYNPRQ8TBG9 265 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 STMN2Q93045 179 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 OTULINQ96BN8 352 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 COG8Q96MW5 612 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 PITX2Q99697 317 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 CIB1Q99828 191 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 HCAR1Q9BXC0 346 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 GABARAPL3Q9BY60 117 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 OR51B6Q9H340 312 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 MED20Q9H944 212 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 MARCH7Q9H992 704 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 TVP23BQ9NYZ1 205 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 USE1Q9NZ43 259 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 COMMD3-BMI1R4GMX3 469 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 PLCE1Q9P212 2302 aa10.16□□□□□ -0.78
HSPG2-206ENST00000439717 IGLV3-9A0A075B6K5 115 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 ZNF593O00488 134 aaPredicted RBP10.15□□□□□ -0.78
HSPG2-206ENST00000439717 ABHD16AO95870 558 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 F12P00748 615 aaPredicted RBP10.15□□□□□ -0.78
HSPG2-206ENST00000439717 IGHV4-39P01824 125 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 ERCC1P07992 297 aaPredicted RBP10.15□□□□□ -0.78
HSPG2-206ENST00000439717 GSTT1P30711 240 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 EFNA4P52798 201 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 KLF3P57682 345 aaPredicted RBP10.15□□□□□ -0.78
HSPG2-206ENST00000439717 MOGQ16653 247 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 KRTAP27-1Q3LI81 207 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 ZNF718Q3SXZ3 478 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 MBNL2Q5VZF2 373 aaKnown RBP10.15□□□□□ -0.78
HSPG2-206ENST00000439717 C12orf73Q69YU5 71 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 CFAP77Q6ZQR2 320 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 RFPL4BQ6ZWI9 263 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 CXXC5Q7LFL8 322 aaKnown RBP10.15□□□□□ -0.78
HSPG2-206ENST00000439717 CPOQ8IVL8 374 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 ZNF101Q8IZC7 436 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 ZNF511Q8NB15 262 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 WFDC11Q8NEX6 87 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 ABHD4Q8TB40 342 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 MARS2Q96GW9 593 aaKnown RBP10.15□□□□□ -0.78
HSPG2-206ENST00000439717 INTS14Q96SY0 518 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 ATF6BQ99941 703 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 SYT3Q9BQG1 590 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 C9orf16Q9BUW7 83 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 RAB1BQ9H0U4 201 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 OR51V1Q9H2C8 321 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 WDR76Q9H967 626 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 DYNLRB1Q9NP97 96 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 PNRC2Q9NPJ4 139 aaKnown RBP10.15□□□□□ -0.78
HSPG2-206ENST00000439717 HINT3Q9NQE9 182 aaKnown RBP10.15□□□□□ -0.78
HSPG2-206ENST00000439717 SLCO1C1Q9NYB5 712 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 DUSP13Q9UII6 198 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 GPR160Q9UJ42 338 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 ORC6Q9Y5N6 252 aa10.15□□□□□ -0.78
HSPG2-206ENST00000439717 PRRC2AP48634 2157 aaKnown RBP10.15□□□□□ -0.79
HSPG2-206ENST00000439717 M0R233 179 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 EI24O14681 340 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 NDUFS7O75251 213 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 IGHV3-13P01766 116 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 ALPLP05186 524 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 SPARCP09486 303 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 EPHA2P29317 976 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 GCH1P30793 250 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 ALDH3A2P51648 485 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 NUDT6P53370 316 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 RAD23AP54725 363 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 DSCR9P59020 149 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 ERVS71-1P61550 626 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 PPP1CBP62140 327 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 EFNB1P98172 346 aa10.14□□□□□ -0.79
HSPG2-206ENST00000439717 KLHL12Q53G59 568 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms