RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SLC17A5Q9NRA2 495 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 DUXBA0A1W2PPF3 345 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 RRP8O43159 456 aaKnown RBP10.59□□□□□ -0.71
PTCH1-209ENST00000437951 GALP22466 123 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 ARSDP51689 593 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 TMEM241Q24JQ0 296 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 C11orf42Q8N5U0 333 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 NEIL2Q969S2 332 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 TIMM8AO60220 97 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-209ENST00000437951 PI4KAP42356 2102 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 RAD52P43351 418 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 TEAD2Q15562 447 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 FAM74A3Q4VXF1 159 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 HSD17B13Q7Z5P4 300 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-209ENST00000437951 FAM26EQ8N5C1 309 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 ARFGAP1Q8N6T3 406 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 TMEM229BQ8NBD8 167 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 TRIP12Q14669 1992 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-209ENST00000437951 PLSCR1O15162 318 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 CD14P08571 375 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 LY6G5CQ5SRR4 150 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 LCN15Q6UWW0 184 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 ANGPTL5Q86XS5 388 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 EXD3Q8N9H8 876 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 FAM174AQ8TBP5 190 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 TMEM231Q9H6L2 316 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 KIR2DS5A0A0G2JLQ3 304 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 A0A0G2JNG1 304 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 C5orf52A6NGY3 159 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 KIR2DS3K7RE56 304 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 OR7C2O60412 319 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 TBX19O60806 448 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 MRPL33O75394 65 aaKnown RBP10.59□□□□□ -0.71
PTCH1-209ENST00000437951 SCO1O75880 301 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 QDPRP09417 244 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 ZNF17P17021 662 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 KIR2DS5Q14953 304 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 SCAMP4Q969E2 229 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 DNAJA3Q96EY1 480 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 CPEB1Q9BZB8 566 aaKnown RBP10.59□□□□□ -0.71
PTCH1-209ENST00000437951 MANBALQ9NQG1 85 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 PSENENQ9NZ42 101 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 MED16Q9Y2X0 877 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 SEC16AO15027 2179 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 A0A1B0GV72 72 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 HMSDA8MTL9 139 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 ZDHHC22Q8N966 263 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 SLCO4A1Q96BD0 722 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 MUCL1Q96DR8 90 aa10.59□□□□□ -0.71
PTCH1-209ENST00000437951 APOBEC3BQ9UH17 382 aaKnown RBP10.59□□□□□ -0.71
PTCH1-209ENST00000437951 CCSO14618 274 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ABCD4O14678 606 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 DNPH1O43598 174 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 FZD6O60353 706 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZFAND5O76080 213 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 GPR75O95800 540 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF25P17030 456 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF765Q7L2R6 523 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 CPEB3Q8NE35 698 aaKnown RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 TP53RKQ96S44 253 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 C1QTNF3Q9BXJ4 246 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 AMBRA1Q9C0C7 1298 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 Q9N2K0 584 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 AQP7O14520 342 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ARPC3O15145 178 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ABOP16442 354 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 G6PCP35575 357 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 MEOX1P50221 254 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF140P52738 457 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 OR5K2Q8NHB8 316 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 PPP1R1CQ8WVI7 109 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 STACQ99469 402 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 OR1A1Q9P1Q5 309 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 NUMBLQ9Y6R0 609 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 PRAMEF25A6NGN4 478 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 A6NL46 340 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 J3KTA2 159 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ACOT8O14734 319 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ARRB2P32121 409 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 NPY5RQ15761 445 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 THEM4Q5T1C6 240 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 PRAMEF5Q5TYX0 476 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 PRAMEF6Q5VXH4 476 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 GLDNQ6ZMI3 551 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ABI3BPQ7Z7G0 1075 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ANKLE1Q8NAG6 615 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 FBXW5Q969U6 566 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 BOD1Q96IK1 185 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 IL17FQ96PD4 163 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 IKZF5Q9H5V7 419 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 SOWAHBA6NEL2 793 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF217O75362 1048 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 CSNK1DP48730 415 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 SYS1Q8N2H4 156 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ARHGEF39Q8N4T4 335 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 GPR62Q9BZJ7 368 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 NDRG4Q9ULP0 352 aaKnown RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 NSG1A0A0A6YYJ2 146 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 FAM72CH0Y354 149 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 C18orf21Q32NC0 220 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms