RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ZNF12P17014 697 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 EGR1P18146 543 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 FUT4P22083 530 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 SDHAP31040 664 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 MDH2P40926 338 aaKnown RBP12.55□□□□□ -0.4
MSH5-208ENST00000429846 GPR4P46093 362 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 SLC6A9P48067 706 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 FOXL1Q12952 345 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 ZNF154Q13106 437 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 KRR1Q13601 381 aaKnown RBP12.55□□□□□ -0.4
MSH5-208ENST00000429846 GPR139Q6DWJ6 353 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 CGB2Q6NT52 195 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 Q6ZR03 302 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 FKBP9P1Q75LS8 142 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 DOK3Q7L591 496 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 ADCK1Q86TW2 530 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 CYP4Z1Q86W10 505 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 LRRC28Q86X40 367 aaPredicted RBP12.55□□□□□ -0.4
MSH5-208ENST00000429846 SLC15A3Q8IY34 581 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 PTP4A1Q93096 173 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 RCN3Q96D15 328 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 HAVCR1Q96D42 359 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 Q96M85 177 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 SIGLEC11Q96RL6 698 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 DCLRE1CQ96SD1 692 aaKnown RBP12.55□□□□□ -0.4
MSH5-208ENST00000429846 GPX7Q96SL4 187 aaPredicted RBP12.55□□□□□ -0.4
MSH5-208ENST00000429846 MRI1Q9BV20 369 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 NMNAT1Q9HAN9 279 aaPredicted RBP12.55□□□□□ -0.4
MSH5-208ENST00000429846 DCAF16Q9NXF7 216 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 NUP50Q9UKX7 468 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 AUP1Q9Y679 476 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 MGAM2Q2M2H8 2515 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 OR6C6A6NF89 314 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 F5H0A9 414 aaPredicted RBP12.54□□□□□ -0.4
MSH5-208ENST00000429846 NDUFAB1O14561 156 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 NDUFB2O95178 105 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 RAC2P15153 192 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 CTLA4P16410 223 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 LIPEQ05469 1076 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 ZMYND11Q15326 602 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 ESCO2Q56NI9 601 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 SLC27A4Q6P1M0 643 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 PGM2L1Q6PCE3 622 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 GLB1L2Q8IW92 636 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 C22orf15Q8WYQ4 148 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 CMBLQ96DG6 245 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 HSH2DQ96JZ2 352 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 OR2V2Q96R30 315 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 HOPXQ9BPY8 73 aaPredicted RBP12.54□□□□□ -0.4
MSH5-208ENST00000429846 SYT4Q9H2B2 425 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 POFUT1Q9H488 388 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 NRIP3Q9NQ35 241 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 MMP26Q9NRE1 261 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 VSX1Q9NZR4 365 aaPredicted RBP12.54□□□□□ -0.4
MSH5-208ENST00000429846 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 OR5V1Q9UGF6 321 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 EGFL7Q9UHF1 273 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 SIGLEC7Q9Y286 467 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 LRCH1Q9Y2L9 728 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 STARD10Q9Y365 291 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 PPIAL4AQ9Y536 164 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 INSIG2Q9Y5U4 225 aa12.54□□□□□ -0.4
MSH5-208ENST00000429846 A0A1W2PRQ8 180 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 GSTA4O15217 222 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 SLC16A7O60669 478 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 KHDRBS3O75525 346 aaKnown RBP12.53□□□□□ -0.4
MSH5-208ENST00000429846 HKR1P10072 659 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 PRTN3P24158 256 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 MMP16P51512 607 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 DGCR6Q14129 220 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 TBPL2Q6SJ96 375 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 FBXW12Q6X9E4 464 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 POU5F2Q8N7G0 328 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 OR5L1Q8NGL2 311 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 OR1F12Q8NHA8 337 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 SLC7A13Q8TCU3 470 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 RASD2Q96D21 266 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 KRCC1Q9NPI7 259 aaPredicted RBP12.53□□□□□ -0.4
MSH5-208ENST00000429846 IL20RAQ9UHF4 553 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 ENPP4Q9Y6X5 453 aa12.53□□□□□ -0.4
MSH5-208ENST00000429846 TRAPPC2LH3BP13 241 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 TMEM178BH3BS89 294 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 NME4O00746 187 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 SASH3O75995 380 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 SERPINA1P01009 418 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 PPIAL4GP0DN37 164 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 ZNF26P17031 533 aaPredicted RBP12.52□□□□□ -0.41
MSH5-208ENST00000429846 SLC7A2P52569 658 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 SEC61A1P61619 476 aaKnown RBP12.52□□□□□ -0.41
MSH5-208ENST00000429846 C1orf94Q6P1W5 598 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 DNM1P34Q6PK57 102 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 SIGLECL1Q8N7X8 197 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 OR8G5Q8NG78 346 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 APOBEC3DQ96AK3 386 aaPredicted RBP12.52□□□□□ -0.41
MSH5-208ENST00000429846 FAM46AQ96IP4 442 aaKnown RBP12.52□□□□□ -0.41
MSH5-208ENST00000429846 ZNF747Q9BV97 191 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 HDHD2Q9H0R4 259 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 GCM1Q9NP62 436 aa12.52□□□□□ -0.41
MSH5-208ENST00000429846 ARMCX1Q9P291 453 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 402.4 ms