RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FZD5Q13467 585 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 RBMS2Q15434 407 aaKnown RBP12.53□□□□□ -0.4
RPL28-202ENST00000426763 REEP6Q96HR9 211 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 ABHD6Q9BV23 337 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 WDR54Q9H977 334 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 ISYNA1Q9NPH2 558 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 ATG2BQ96BY7 2078 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 FAM157BP0CG42 384 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 PTGS2P35354 604 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 LGALS4P56470 323 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 ISXQ2M1V0 245 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 LHFPL2Q6ZUX7 228 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 GPR137BO60478 399 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 MT-CO2P00403 227 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
RPL28-202ENST00000426763 RAC1P63000 192 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 EDDM3AQ14507 147 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 FBXW12Q6X9E4 464 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 DPPA2Q7Z7J5 298 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 EGFL6Q8IUX8 553 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
RPL28-202ENST00000426763 OR5H15A6NDH6 313 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 CEBPZOSA8MTT3 80 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 CPEP16870 476 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 PRKACAP17612 351 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.53□□□□□ -0.4
RPL28-202ENST00000426763 C16orf47Q6ZP98 133 aaPredicted RBP12.53□□□□□ -0.4
RPL28-202ENST00000426763 UBE3DQ7Z6J8 389 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 PHC2Q8IXK0 858 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 CD300LFQ8TDQ1 290 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 OR2B2Q9GZK3 357 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 PBOV1Q9GZY1 135 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 C12orf10Q9HB07 376 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 SDHAF2Q9NX18 166 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 PTTG3PQ9NZH4 202 aa12.53□□□□□ -0.4
RPL28-202ENST00000426763 CLEC2LP0C7M8 214 aa12.52□□□□□ -0.4
RPL28-202ENST00000426763 PEBP1P30086 187 aaKnown RBP12.52□□□□□ -0.4
RPL28-202ENST00000426763 CAMK2BQ13554 666 aa12.52□□□□□ -0.4
RPL28-202ENST00000426763 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.4
RPL28-202ENST00000426763 MDGA2Q7Z553 956 aa12.52□□□□□ -0.4
RPL28-202ENST00000426763 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.52□□□□□ -0.4
RPL28-202ENST00000426763 ZNF573Q86YE8 665 aa12.52□□□□□ -0.4
RPL28-202ENST00000426763 C1orf87Q8N0U7 546 aa12.52□□□□□ -0.4
RPL28-202ENST00000426763 SECTM1Q8WVN6 248 aa12.52□□□□□ -0.4
RPL28-202ENST00000426763 RASL10BQ96S79 203 aa12.52□□□□□ -0.4
RPL28-202ENST00000426763 PLEKHA3Q9HB20 300 aa12.52□□□□□ -0.4
RPL28-202ENST00000426763 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 SLC22A23A1A5C7 686 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 NRASP01111 189 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 MC2RQ01718 297 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 AQP6Q13520 282 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 DOC2BQ14184 412 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 IDO2Q6ZQW0 420 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 TRILQ7L0X0 811 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 SNX18Q96RF0 628 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 SIGLEC11Q96RL6 698 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 UFSP2Q9NUQ7 469 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 CNTRLQ7Z7A1 2325 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 TMEM82A0PJX8 343 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 ANKRD61A6NGH8 418 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 SULT1B1O43704 296 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 CALCBP10092 127 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 DLX5P56178 289 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 ZNF616Q08AN1 781 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 LYPD4Q6UWN0 246 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 OR51F2Q8NH61 342 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 CCDC86Q9H6F5 360 aaKnown RBP12.52□□□□□ -0.41
RPL28-202ENST00000426763 PILRBQ9UKJ0 227 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 IFNA17P01571 189 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 PTGER4P35408 488 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 RPS27P42677 84 aaKnown RBP12.52□□□□□ -0.41
RPL28-202ENST00000426763 CAMLGP49069 296 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 LCN10Q6JVE6 187 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 PAQR6Q6TCH4 344 aa12.52□□□□□ -0.41
RPL28-202ENST00000426763 I3L521 148 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 CYR61O00622 381 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 NDUFB7P17568 137 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 OPA3Q9H6K4 179 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 FBXO34Q9NWN3 711 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 TAS2R3Q9NYW6 316 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 ZNF732B4DXR9 585 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 GP1BAP07359 652 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 F2RL1P55085 397 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 TOMM34Q15785 309 aaPredicted RBP12.51□□□□□ -0.41
RPL28-202ENST00000426763 TMEM211Q6ICI0 200 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 DMBX1Q8NFW5 382 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 GPR32P1Q8NGA4 272 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 PSD2Q9BQI7 771 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 DPCDQ9BVM2 203 aaPredicted RBP12.51□□□□□ -0.41
RPL28-202ENST00000426763 FBXO8Q9NRD0 319 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 IL20Q9NYY1 176 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 ENSAO43768 121 aaKnown RBP12.51□□□□□ -0.41
RPL28-202ENST00000426763 ZNF728P0DKX0 622 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 ALDH3B2P48448 385 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 INSM1Q01101 510 aaPredicted RBP12.51□□□□□ -0.41
RPL28-202ENST00000426763 ADPRMQ3LIE5 342 aa12.51□□□□□ -0.41
RPL28-202ENST00000426763 MSI2Q96DH6 328 aaKnown RBP12.51□□□□□ -0.41
RPL28-202ENST00000426763 SMIM19Q96E16 107 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms