RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 UCNP55089 124 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 CLDN6P56747 220 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 SCARF2Q96GP6 870 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-205ENST00000414879 RNF170Q96K19 258 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 TRIB1Q96RU8 372 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 EMC6Q9BV81 110 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 TRPM6Q9BX84 2022 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 IGHA2P01877 340 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 PLGLAQ15195 96 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 HES3Q5TGS1 186 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 PWWP2BQ6NUJ5 590 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 B3GLCTQ6Y288 498 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 SULT4A1Q9BR01 284 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 OR2S2Q9NQN1 319 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 SH3BGRL2Q9UJC5 107 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 RALGAPA2Q2PPJ7 1873 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 PRSS23O95084 383 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 HLA-AP01891 365 aaKnown RBP10.82□□□□□ -0.68
PTPRF-205ENST00000414879 NGFRP08138 427 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 DEFA5Q01523 94 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 RAB35Q15286 201 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 OR8G1Q15617 311 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 CFAP77Q6ZQR2 320 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 IDO2Q6ZQW0 420 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 WDSUB1Q8N9V3 476 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 DCUN1D4Q92564 292 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 VSTM2LQ96N03 204 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 OR8B4Q96RC9 309 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 MFFQ9GZY8 342 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 C12orf49Q9H741 205 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 FAM60AQ9NP50 221 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 SLC17A5Q9NRA2 495 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 TCRBV16S1A1N1A0A5B0 115 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 TRIM64BA6NI03 449 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 CYR61O00622 381 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 ZNF728P0DKX0 622 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 CAMLGP49069 296 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 MC2RQ01718 297 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 TFF2Q03403 129 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 DRAM2Q6UX65 266 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 OR51D1Q8NGF3 324 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 OTOSQ8NHW6 89 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 GLYATL2Q8WU03 294 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 ASB13Q8WXK3 278 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 ANKRD9Q96BM1 317 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-205ENST00000414879 USB1Q9BQ65 265 aaKnown RBP10.82□□□□□ -0.68
PTPRF-205ENST00000414879 NAA50Q9GZZ1 169 aaKnown RBP10.82□□□□□ -0.68
PTPRF-205ENST00000414879 OR51B6Q9H340 312 aa10.82□□□□□ -0.68
PTPRF-205ENST00000414879 MYEF2Q9P2K5 600 aaKnown RBP10.82□□□□□ -0.68
PTPRF-205ENST00000414879 SMCO3A2RU48 225 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 ANKRD61A6NGH8 418 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 RFX2P48378 723 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 CAV2P51636 162 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 PMPCAQ10713 525 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 LAX1Q8IWV1 398 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 SUN5Q8TC36 379 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 CCDC86Q9H6F5 360 aaKnown RBP10.81□□□□□ -0.68
PTPRF-205ENST00000414879 KCNIP2Q9NS61 270 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 GNG12Q9UBI6 72 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 OR14J1Q9UGF5 321 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 B3GALT1Q9Y5Z6 326 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 DOCK3Q8IZD9 2030 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 ACTL6AO96019 429 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 GABRA1P14867 456 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 F2RL1P55085 397 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 TFAP2EQ6VUC0 442 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 NUFIP2Q7Z417 695 aaKnown RBP10.81□□□□□ -0.68
PTPRF-205ENST00000414879 IL1F10Q8WWZ1 152 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 SPSB1Q96BD6 273 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 SIGLEC11Q96RL6 698 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 GON7Q9BXV9 100 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 TCFL5Q9UL49 500 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 KCNE3Q9Y6H6 103 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 MYBPHQ13203 477 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 TATDN3Q17R31 274 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 TMEM179BQ7Z7N9 219 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 DEFB124Q8NES8 71 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 OR4C3Q8NH37 302 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 ARL11Q969Q4 196 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 DCLRE1CQ96SD1 692 aaKnown RBP10.81□□□□□ -0.68
PTPRF-205ENST00000414879 EMC7Q9NPA0 242 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 TAS2R16Q9NYV7 291 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 GDF2Q9UK05 429 aaPredicted RBP10.81□□□□□ -0.68
PTPRF-205ENST00000414879 WDR81Q562E7 1941 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 DEGS1O15121 323 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 SPINT1O43278 529 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 F10P00742 488 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 MT-ND4P03905 459 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 GSTP1P09211 210 aaKnown RBP10.81□□□□□ -0.68
PTPRF-205ENST00000414879 SFTPCP11686 197 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 S100PP25815 95 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 FAPQ12884 760 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 GK2Q14410 553 aaPredicted RBP10.81□□□□□ -0.68
PTPRF-205ENST00000414879 TSC22D1Q15714 1073 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 Q8IYB0 196 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 KDM8Q8N371 416 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 GPR32P1Q8NGA4 272 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 OR2G2Q8NGZ5 317 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 PBOV1Q9GZY1 135 aa10.81□□□□□ -0.68
PTPRF-205ENST00000414879 HAO2Q9NYQ3 351 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms