RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 RUNX1T1Q06455 604 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 RPL18Q07020 188 aaKnown RBP4.24□□□□□ -1.73
VPS41-205ENST00000414632 ST3GAL3Q11203 375 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 KEAP1Q14145 624 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 MFSD13AQ14CX5 517 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 TRAM2Q15035 370 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 CEACAM16Q2WEN9 425 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 BEX5Q5H9J7 111 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 HMBOX1Q6NT76 420 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 PODNL1Q6PEZ8 512 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 PAMR1Q6UXH9 720 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 ZNF730Q6ZMV8 503 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 Q6ZNX1 250 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 SLC35D2Q76EJ3 337 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 RHOUQ7L0Q8 258 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 HIST3H2AQ7L7L0 130 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 TRPM8Q7Z2W7 1104 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 BCDIN3DQ7Z5W3 292 aaKnown RBP4.24□□□□□ -1.73
VPS41-205ENST00000414632 MYPOPQ86VE0 399 aaPredicted RBP4.24□□□□□ -1.73
VPS41-205ENST00000414632 CYP4Z1Q86W10 505 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 OFCC1Q8IZS5 231 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 TMEM123Q8N131 208 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 CLDN22Q8N7P3 220 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 WDR31Q8NA23 367 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 POMGNT2Q8NAT1 580 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 SYT14Q8NB59 555 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 SETD9Q8NE22 299 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 OR1K1Q8NGR3 316 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 OR13C2Q8NGS9 318 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 OR6N1Q8NGY5 312 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 OR6S1Q8NH40 331 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 OR51A7Q8NH64 312 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 FAM110DQ8TAY7 271 aaPredicted RBP4.24□□□□□ -1.73
VPS41-205ENST00000414632 HSD17B8Q92506 261 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 HIST1H2ACQ93077 130 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 BPIFA2Q96DR5 249 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 MUCL1Q96DR8 90 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 PYURFQ96I23 114 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 RADILQ96JH8 1075 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 HS6ST2Q96MM7 605 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 TNFRSF13CQ96RJ3 184 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 THTPAQ9BU02 230 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 ULBP2Q9BZM5 246 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 NMNAT1Q9HAN9 279 aaPredicted RBP4.24□□□□□ -1.73
VPS41-205ENST00000414632 NOX3Q9HBY0 568 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 CRLF2Q9HC73 371 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 SLC17A5Q9NRA2 495 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 NDE1Q9NXR1 346 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 TAS2R16Q9NYV7 291 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 IL20RAQ9UHF4 553 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 ZNF229Q9UJW7 825 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 SAMD4AQ9UPU9 718 aaKnown RBP4.24□□□□□ -1.73
VPS41-205ENST00000414632 TMEM5Q9Y2B1 443 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 RNF115Q9Y4L5 304 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 SLC25A15Q9Y619 301 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 HIVEP1P15822 2718 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 ROS1P08922 2347 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 CREBBPQ92793 2442 aa4.24□□□□□ -1.73
VPS41-205ENST00000414632 FLNAP21333 2647 aaKnown RBP4.24□□□□□ -1.73
VPS41-205ENST00000414632 CHD3Q12873 2000 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 A0A1W2PRG6 482 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 LINC00473A8K010 186 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 EFCAB9A8MZ26 197 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 MCIDASD6RGH6 385 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 CDC42EP2O14613 210 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 AKAP8O43823 692 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 SLC2A10O95528 541 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 RAF1P04049 648 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 SEMG1P04279 462 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 FABP3P05413 133 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 H1F0P07305 194 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 PATE4P0C8F1 98 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 THRBP10828 461 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 B4GALT1P15291 398 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 RRM2P31350 389 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 IFNA8P32881 189 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 SLC9A3P48764 834 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 PCYT1AP49585 367 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 IDH3GP51553 393 aaPredicted RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 MNAT1P51948 309 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 CDH11P55287 796 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 ERVK-25P63136 954 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 PRKCDQ05655 676 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 FMODQ06828 376 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 NPRL3Q12980 569 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 ACKR1Q16570 336 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 ALG10Q5BKT4 473 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 TIMM23BQ5SRD1 257 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 NCMAPQ5T1S8 102 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 OTPQ5XKR4 325 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 NHLRC1Q6VVB1 395 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 B3GLCTQ6Y288 498 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 ZNF813Q6ZN06 617 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 MBOAT2Q6ZWT7 520 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 PEG10Q86TG7 708 aaKnown RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 DHFR2Q86XF0 187 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 ZDHHC21Q8IVQ6 265 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 C20orf196Q8IYI0 205 aa4.23□□□□□ -1.73
VPS41-205ENST00000414632 LILRB1Q8NHL6 650 aaPredicted RBP4.23□□□□□ -1.73
VPS41-205ENST00000414632 SLC7A13Q8TCU3 470 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms