RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 SMG6Q86US8 1419 aaKnown RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 NFAT5O94916 1531 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 CD163L1Q9NR16 1453 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 CNTNAP1P78357 1384 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 KIR2DL5BA0A0G2JN68 375 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 KIR2DL5BA0A0G2JPC4 375 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 hCG_38984A0A1B0GV85 526 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 F5H5T6 163 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 H7C2Y5 167 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 GFYI3L273 518 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 CCL21O00585 134 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 ACOT8O14734 319 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 PFDN6O15212 129 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 SSNA1O43805 119 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 PRKNO60260 465 aaPredicted RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 RAMP1O60894 148 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 CDK2AP2O75956 126 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 GAGE7O76087 117 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 CTDNEP1O95476 244 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 KRT75O95678 551 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 OXTP01178 125 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 HOXB7P09629 217 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 GAGE12FP0CL80 117 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 GAGE12GP0CL81 117 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 GAGE12IP0CL82 117 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 CCDC166P0CW27 439 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 CELP19835 753 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 PVALBP20472 110 aaPredicted RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 SSTR2P30874 369 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 GNRHRP30968 328 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 DCTP40126 519 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 ZFP36L2P47974 494 aaKnown RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 TFPI2P48307 235 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 RASSF2P50749 326 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 SSR4P51571 173 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 STC1P52823 247 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 OR10A3P58181 314 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 RANP62826 216 aaKnown RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 RPL8P62917 257 aaKnown RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 PAFAH1B2P68402 229 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 GAGE1Q13065 139 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 GAGE4Q13068 117 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 GGTLC2Q14390 218 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 SMCO1Q147U7 214 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 PTGES3Q15185 160 aaKnown RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 CD226Q15762 336 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 OR10J3Q5JRS4 329 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 ZNF530Q6P9A1 599 aaPredicted RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 ZNF782Q6ZMW2 699 aaPredicted RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 Q6ZT83 130 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 C9orf139Q6ZV77 190 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 SMIM5Q71RC9 77 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 PRSS48Q7RTY5 328 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 TMED4Q7Z7H5 227 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 LYG2Q86SG7 212 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 KIR2DL5AQ8N109 375 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 PDIK1LQ8N165 341 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 STK40Q8N2I9 435 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 WDR31Q8NA23 367 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 ZNF740Q8NDX6 193 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 SEMA6DQ8NFY4 1073 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 KIR2DL5BQ8NHK3 375 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 SYNPRQ8TBG9 265 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 MCOLN3Q8TDD5 553 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 PYROXD1Q8WU10 500 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 IL1F10Q8WWZ1 152 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 TLCD1Q96CP7 247 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 MS4A4EQ96PG1 132 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 CWH43Q9H720 699 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 TMEM27Q9HBJ8 222 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 CMTM6Q9NX76 183 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 FOXJ2Q9P0K8 574 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 WRAP73Q9P2S5 460 aaPredicted RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 SLC17A6Q9P2U8 582 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 MUTYHQ9UIF7 546 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 SBF2Q86WG5 1849 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 ARHGEF28Q8N1W1 1705 aaKnown RBP4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 PAPPAQ13219 1627 aa4.97□□□□□ -1.61
CBX1P3-201ENST00000413296 NHSQ6T4R5 1651 aa4.96□□□□□ -1.61
CBX1P3-201ENST00000413296 KIF24Q5T7B8 1368 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 SMIM28A0A1B0GU29 152 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 USP27XA6NNY8 438 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 NEDD8-MDP1E9PL57 170 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 DFFAO00273 331 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 KPNA3O00505 521 aaPredicted RBP4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 BIRC5O15392 142 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 PRKYO43930 277 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 FADS1O60427 444 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 CDC40O60508 579 aaKnown RBP eCLIP4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 CTNSO60931 367 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 IFNA16P05015 189 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 LGALS2P05162 132 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 LIPCP11150 499 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 UGT2B7P16662 529 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 SPINK2P20155 84 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 PRKXP51817 358 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 CLDN12P56749 244 aa4.96□□□□□ -1.62
CBX1P3-201ENST00000413296 HERV-K104P61576 105 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms