RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 GYPBP06028 91 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 ADRA2AP08913 450 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 GGT2P36268 569 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 KPNB1Q14974 876 aaKnown RBP26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 SLC18B1Q6NT16 456 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 LYPD4Q6UWN0 246 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 HIPK1Q86Z02 1210 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 LINC00346Q8IVM7 164 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 OR1F12Q8NHA8 337 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 SYNPRQ8TBG9 265 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 SLC7A6Q92536 515 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 C4orf45Q96LM5 186 aa26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 PAPOLBQ9NRJ5 636 aaKnown RBP26.73■■□□□ 1.87
TRAF3IP1-203ENST00000409739 A0A1W2PPW3 197 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 ABHD16AO95870 558 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 NGFP01138 241 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 INHBBP09529 407 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 CLUP10909 449 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 SPI1P17947 270 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 ALDH3B1P43353 468 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 KLF3P57682 345 aaPredicted RBP26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 CDK5Q00535 292 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 MAD2L1BPQ15013 274 aaPredicted RBP26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 SPATA46Q5T0L3 261 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 CLEC2AQ6UVW9 174 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 UNQ6126/PRO20091Q6UXV3 157 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 CFAP77Q6ZQR2 320 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 PYDC1Q8WXC3 89 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 HDHD2Q9H0R4 259 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 RAB1BQ9H0U4 201 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 CYB5R1Q9UHQ9 305 aa26.72■■□□□ 1.87
TRAF3IP1-203ENST00000409739 YLPM1P49750 1951 aaKnown RBP26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 TVP23AA6NH52 213 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 G3V2T6 193 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 ZNF23P17027 643 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 ELFN2Q5R3F8 820 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 PARP8Q8N3A8 854 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 SLC25A40Q8TBP6 338 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 MARS2Q96GW9 593 aaKnown RBP26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 HCAR1Q9BXC0 346 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 GABARAPL1Q9H0R8 117 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 TPK1Q9H3S4 243 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 MED20Q9H944 212 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 ELOVL3Q9HB03 270 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 KCNG2Q9UJ96 466 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 COMMD3-BMI1R4GMX3 469 aa26.71■■□□□ 1.87
TRAF3IP1-203ENST00000409739 FAM183AA6NL82 134 aa26.7■■□□□ 1.86
TRAF3IP1-203ENST00000409739 SMAD7O15105 426 aaKnown RBP26.7■■□□□ 1.86
TRAF3IP1-203ENST00000409739 DBHP09172 617 aa26.7■■□□□ 1.86
TRAF3IP1-203ENST00000409739 PPP1CBP62140 327 aa26.7■■□□□ 1.86
TRAF3IP1-203ENST00000409739 COQ7Q99807 217 aa26.7■■□□□ 1.86
TRAF3IP1-203ENST00000409739 CDADC1Q9BWV3 514 aa26.7■■□□□ 1.86
TRAF3IP1-203ENST00000409739 SLC25A19Q9HC21 320 aa26.7■■□□□ 1.86
TRAF3IP1-203ENST00000409739 IGHV4-30-2A0A087WSY4 118 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 SURF4O15260 269 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 PSKH1P11801 424 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ZNF823P16415 610 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 DSCR9P59020 149 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 SELENOVP59797 346 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 TMEM255AQ5JRV8 349 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ARL9Q6T311 187 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ZDHHC13Q8IUH4 622 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 C1orf174Q8IYL3 243 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 OR2AJ1Q8NGZ0 328 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 OR2J1Q9GZK6 312 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 SEMA6AQ9H2E6 1030 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 TBCCD1Q9NVR7 557 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 TAAR3PQ9P1P4 343 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 GRIP1Q9Y3R0 1128 aa26.69■■□□□ 1.86
TRAF3IP1-203ENST00000409739 RNF223E7ERA6 249 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ERCC1P07992 297 aaPredicted RBP26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 CSF3P09919 207 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 FMO3P31513 532 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 MPV17P39210 176 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 RPS27P42677 84 aaKnown RBP26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 CRISP1P54107 249 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 NKPD1Q17RQ9 610 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ALKBH6Q3KRA9 238 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ZNF718Q3SXZ3 478 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 LINC01590Q5TEZ4 76 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 TMEM236Q5W0B7 351 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ZNF511Q8NB15 262 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 OR6K6Q8NGW6 343 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 IPCEF1Q8WWN9 437 aaPredicted RBP26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 NEU4Q8WWR8 484 aaPredicted RBP26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 CENPNQ96H22 339 aaPredicted RBP26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 SMR3AQ99954 134 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 RHNO1Q9BSD3 238 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 MS4A5Q9H3V2 200 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 WDR76Q9H967 626 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 PNRC2Q9NPJ4 139 aaKnown RBP26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 TLN2Q9Y4G6 2542 aa26.68■■□□□ 1.86
TRAF3IP1-203ENST00000409739 H3BSA7 217 aa26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 IGHV3-13P01766 116 aa26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 HMGN1P05114 100 aa26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 MBNL2Q5VZF2 373 aaKnown RBP26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 KLF14Q8TD94 323 aaPredicted RBP26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 C10orf105Q8TEF2 133 aa26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 FAM168AQ92567 244 aa26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 MAP6Q96JE9 813 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms