RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 DCDC5Q6ZRR9 648 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 OTOSQ8NHW6 89 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 KCTD12Q96CX2 325 aaKnown RBP8.14□□□□□ -1.11
LIG4-202ENST00000405925 ORAI1Q96D31 301 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 CCDC120Q96HB5 630 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 DNTTIP1Q9H147 329 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 FBXO9Q9UK97 447 aaPredicted RBP8.14□□□□□ -1.11
LIG4-202ENST00000405925 IGKV3D-11A0A0A0MRZ8 115 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 DVL2O14641 736 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 CRYAAP02489 173 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 NGFRP08138 427 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 PTH2RP49190 550 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 PMP22Q01453 160 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 RNPS1Q15287 305 aaKnown RBP8.14□□□□□ -1.11
LIG4-202ENST00000405925 PLPPR5Q32ZL2 321 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 CDCP2Q5VXM1 449 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 LCN10Q6JVE6 187 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 ZNF554Q86TJ5 538 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 WFDC8Q8IUA0 241 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 SULF2Q8IWU5 870 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 SEMA6DQ8NFY4 1073 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 PPP1R35Q8TAP8 253 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 KISS1RQ969F8 398 aaPredicted RBP8.14□□□□□ -1.11
LIG4-202ENST00000405925 MCHR2Q969V1 340 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 ZNF285Q96NJ3 590 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 OR8B4Q96RC9 309 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 PRSS27Q9BQR3 290 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 ST6GALNAC5Q9BVH7 336 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 SPTBN1Q01082 2364 aaKnown RBP8.14□□□□□ -1.11
LIG4-202ENST00000405925 C13orf42A0A1B0GVH6 325 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 RER1O15258 196 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 RECKO95980 971 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 IFNA21P01568 189 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 HRGP04196 525 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 IFI6P09912 130 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 LIMS3P0CW19 117 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 LIMS4P0CW20 117 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 CPEP16870 476 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 FABP5Q01469 135 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 ZFP36L1Q07352 338 aaKnown RBP8.14□□□□□ -1.11
LIG4-202ENST00000405925 CDC20Q12834 499 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 RAB12Q6IQ22 244 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 DOK3Q7L591 496 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 SLC22A24Q8N4F4 322 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 OR5H2Q8NGV7 314 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 VOPP1Q96AW1 172 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 METTL9Q9H1A3 318 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 NDUFB11Q9NX14 153 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 TAS2R4Q9NYW5 299 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 KCNN3Q9UGI6 736 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 TRAPPC4Q9Y296 219 aa8.14□□□□□ -1.11
LIG4-202ENST00000405925 MPZL1O95297 269 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 DIRAS3O95661 229 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 RAB3DO95716 219 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 EDN3P14138 238 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 UQCRC1P31930 480 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 VEGFCP49767 419 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 NUBP1P53384 320 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 ZNF121P58317 390 aaPredicted RBP8.13□□□□□ -1.11
LIG4-202ENST00000405925 TRAPPC6BQ86SZ2 158 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 BATF2Q8N1L9 274 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 CISD2Q8N5K1 135 aaKnown RBP8.13□□□□□ -1.11
LIG4-202ENST00000405925 ASCC1Q8N9N2 400 aaKnown RBP8.13□□□□□ -1.11
LIG4-202ENST00000405925 ABHD3Q8WU67 409 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 RAB40AQ8WXH6 277 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 TOMM40LQ969M1 308 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 TP63Q9H3D4 680 aaPredicted RBP8.13□□□□□ -1.11
LIG4-202ENST00000405925 ZMAT3Q9HA38 289 aaKnown RBP8.13□□□□□ -1.11
LIG4-202ENST00000405925 GPR173Q9NS66 373 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 KCNIP1Q9NZI2 227 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 R4GMQ9 66 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 A0A1W2PQ09 198 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 NTN3O00634 580 aaPredicted RBP8.13□□□□□ -1.11
LIG4-202ENST00000405925 BHLHE40O14503 412 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 FADS1O60427 444 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 PATE4P0C8F1 98 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 ARR3P36575 388 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 RBMXP38159 391 aaKnown RBP8.13□□□□□ -1.11
LIG4-202ENST00000405925 RAB1AP62820 205 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 AQP6Q13520 282 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 ELFN2Q5R3F8 820 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 ANKRD16Q6P6B7 361 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 TIPARPQ7Z3E1 657 aaKnown RBP8.13□□□□□ -1.11
LIG4-202ENST00000405925 ANGPTL5Q86XS5 388 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 MESP1Q9BRJ9 268 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 THAP7Q9BT49 309 aaPredicted RBP8.13□□□□□ -1.11
LIG4-202ENST00000405925 HES7Q9BYE0 225 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 TTTY12Q9BZ98 90 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 SELENOIQ9C0D9 397 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 MOB1AQ9H8S9 216 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 LIN7BQ9HAP6 207 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 GPR27Q9NS67 375 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 DIDO1Q9BTC0 2240 aaKnown RBP8.13□□□□□ -1.11
LIG4-202ENST00000405925 A0A1W2PR80 420 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 C9orf172C9J069 976 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 LYRM1O43325 122 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 HLA-HP01893 362 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 HLA-DMAP28067 261 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 CLDN20P56880 219 aa8.13□□□□□ -1.11
LIG4-202ENST00000405925 MZT1Q08AG7 82 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms