RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PPP1CAP62136 330 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 RPL38P63173 70 aaKnown RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 CCL7P80098 99 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 HMGCS1Q01581 520 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF763Q0D2J5 394 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 DDX39BQ13838 428 aaKnown RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 FAM53BQ14153 422 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 CRMP1Q14194 572 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 MAPRE2Q15555 327 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 NDUFA9Q16795 377 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 COQ5Q5HYK3 327 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 IL23RQ5VWK5 629 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 FRMPD2BQ6IN97 320 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ADNP2Q6IQ32 1131 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 NOXRED1Q6NXP6 359 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 TRIM40Q6P9F5 258 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 SCIMPQ6UWF3 145 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 DPY19L2P2Q6ZN68 376 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 FAM92BQ6ZTR7 304 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ABHD13Q7L211 337 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 CDC20BQ86Y33 519 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 RIMKLAQ8IXN7 391 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZCCHC7Q8N3Z6 543 aaKnown RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 NATD1Q8N6N6 113 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 Q8N9G6 341 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 RERGQ96A58 199 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 TESCQ96BS2 214 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 MS4A6EQ96DS6 147 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 CMTM5Q96DZ9 223 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 SMIM10Q96HG1 83 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 PPP1R36Q96LQ0 422 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 TGM7Q96PF1 710 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 HBEGFQ99075 208 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF717Q9BY31 904 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 NMUR2Q9GZQ4 415 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 AICDAQ9GZX7 198 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR51B5Q9H339 312 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 STARD5Q9NSY2 213 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 LYARQ9NX58 379 aaKnown RBP3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 IL20RAQ9UHF4 553 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 RNF24Q9Y225 148 aa3.83□□□□□ -1.8
HMGB3P19-201ENST00000403971 SPEGQ15772 3267 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 PIEZO1Q92508 2521 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 TRAV9-2A0A087WT02 112 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 A0A0A6YYD5 115 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 BBIP1A8MTZ0 92 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 NSA2O95478 260 aaKnown RBP3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 TGFAP01135 160 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 NPPAP01160 153 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 SERPIND1P05546 499 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 HBQ1P09105 142 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 ANXA4P09525 319 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 GP9P14770 177 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 SDC1P18827 310 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 HIST1H1TP22492 207 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 CALB2P22676 271 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 ATP5A1P25705 553 aaKnown RBP3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 SSR2P43308 183 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 RAP1GDS1P52306 607 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 IST1P53990 364 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 MFAP2P55001 183 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 MTTPP55157 894 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 VSX2P58304 361 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 LRRC74AQ0VAA2 488 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 BNIP1Q12981 228 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 STX5Q13190 355 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 EIF3IQ13347 325 aaKnown RBP3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 RCAN2Q14206 197 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 LTB4RQ15722 352 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 HIGD2BQ4VC39 106 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 LINC00242Q5T6M2 205 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF774Q6NX45 483 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 ISLR2Q6UXK2 745 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 COMMD6Q7Z4G1 85 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 HPS6Q86YV9 775 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 FUNDC1Q8IVP5 155 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 RNF175Q8N4F7 328 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 CSNK1A1LQ8N752 337 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 ACOT4Q8N9L9 421 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 TTC29Q8NA56 475 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR8J2Q8NGG1 315 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 LHX4Q969G2 390 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 C1orf147Q96MC9 270 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 CATSPER2Q96P56 530 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 DPY30Q9C005 99 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 FANCEQ9HB96 536 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 LYRM4Q9HD34 91 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 LHX9Q9NQ69 397 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 FBXO8Q9NRD0 319 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 SOHLH2Q9NX45 425 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 MS4A12Q9NXJ0 267 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 TAS2R7Q9NYW3 318 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 CNOT2Q9NZN8 540 aaKnown RBP3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF581Q9P0T4 197 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 TMEM9Q9P0T7 183 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 PHF11Q9UIL8 331 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 POLR3HQ9Y535 204 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 EXPH5Q8NEV8 1989 aa3.82□□□□□ -1.8
HMGB3P19-201ENST00000403971 CNTRLQ7Z7A1 2325 aa3.81□□□□□ -1.8
HMGB3P19-201ENST00000403971 A0A1W2PP18 115 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms