RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PSMB10P40306 273 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PRSS12P56730 875 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 RPL15P61313 204 aaKnown RBP9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 VSNL1P62760 191 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 EGR3Q06889 387 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 IFFO1Q0D2I5 559 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SELPLGQ14242 412 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 C2orf68Q2NKX9 166 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 LDLRAD3Q86YD5 345 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 GOLGA6L1Q8N7Z2 621 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 CPPED1Q9BRF8 314 aaPredicted RBP9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SLC30A2Q9BRI3 323 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TMEM109Q9BVC6 243 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SIRPDQ9H106 197 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 KCNN2Q9H2S1 579 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SMURF2Q9HAU4 748 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ELOVL3Q9HB03 270 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SMURF1Q9HCE7 757 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 EMC7Q9NPA0 242 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ANGPT4Q9Y264 503 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SIGLEC9Q9Y336 463 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TIMM10BQ9Y5J6 103 aa9.83□□□□□ -0.84
SPTLC1P3-201ENST00000403408 IGHV1-69DA0A0B4J2H0 117 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ZNF816-ZNF321PA0A0X1KG74 233 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TRAPPC13A5PLN9 417 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 MEGF11A6BM72 1044 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ZNF879B4DU55 563 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 F5H5P2 479 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 M0QX08 132 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 IGHV1-69P01742 117 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 HIST1H2ABP04908 130 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DBHP09172 617 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 CPT2P23786 658 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SLC6A2P23975 617 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ARHGDIAP52565 204 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 BPIFB3P59826 476 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PRB3Q04118 309 aaPredicted RBP9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 CD47Q08722 323 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 COX10Q12887 443 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 FHL1Q13642 323 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OXLD1Q5BKU9 147 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TNFAIP8L3Q5GJ75 292 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OR2T2Q6IF00 324 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 C11orf87Q6NUJ2 197 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 HIST3H2AQ7L7L0 130 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PDZD9Q8IXQ8 264 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 FGFRL1Q8N441 504 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ATG16L2Q8NAA4 619 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 LRRC75AQ8NAA5 344 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OR8B3Q8NGG8 313 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 MRAPQ8TCY5 172 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TMEM255BQ8WV15 326 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ANP32BQ92688 251 aaKnown RBP9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 HIST1H2ACQ93077 130 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TAMM41Q96BW9 452 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ITPKCQ96DU7 683 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OR8B2Q96RD0 313 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PCDHAC1Q9H158 963 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SSU72Q9NP77 194 aaKnown RBP9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 POLE4Q9NR33 117 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ACOXLQ9NUZ1 547 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 CLN8Q9UBY8 286 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TMCC3Q9ULS5 477 aa9.82□□□□□ -0.84
SPTLC1P3-201ENST00000403408 A0A1B0GWJ7 208 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TRPC5OSA6NMA1 111 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 P2RY10O00398 339 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PHYHO14832 338 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 UBDO15205 165 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PIP5K1CO60331 668 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TSPAN9O75954 239 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 FSTL3O95633 263 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 MT-ND1P03886 318 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TNFRSF1BP20333 461 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 GSTM3P21266 225 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DAP3P51398 398 aaKnown RBP9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DBPQ10586 325 aaPredicted RBP9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 MAB21L1Q13394 359 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TOP3AQ13472 1001 aaPredicted RBP9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ZNF181Q2M3W8 571 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 CLEC12AQ5QGZ9 265 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 C1orf94Q6P1W5 598 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 BLOC1S3Q6QNY0 202 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 UNQ6126/PRO20091Q6UXV3 157 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DLEU7Q6UYE1 221 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 VASH1Q7L8A9 365 aaPredicted RBP9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ZER1Q7Z7L7 766 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 IGFN1Q86VF2 1251 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ALDH16A1Q8IZ83 802 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 NPEPL1Q8NDH3 523 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TBC1D15Q8TC07 691 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 AENQ8WTP8 325 aaKnown RBP9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 LIPHQ8WWY8 451 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 GATAD2BQ8WXI9 593 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PTP4A1Q93096 173 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 LHX4Q969G2 390 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PLEKHA8Q96JA3 519 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 WDFY2Q96P53 400 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 RASSF4Q9H2L5 321 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TXNIPQ9H3M7 391 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 AURKAIP1Q9NWT8 199 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms