RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ERFP50548 548 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 EGR3Q06889 387 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 STX3Q13277 289 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 SCARB2Q14108 478 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 ENDOGQ14249 297 aaKnown RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 RUNDC3AQ59EK9 446 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 ENTPD8Q5MY95 495 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 FAM201AQ5SY85 155 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 CD276Q5ZPR3 534 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 DHRS7BQ6IAN0 325 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 ARMC8Q8IUR7 673 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 MSRB3Q8IXL7 192 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 GOLGA6L1Q8N7Z2 621 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 ATG16L2Q8NAA4 619 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 MPP4Q96JB8 637 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 WDFY2Q96P53 400 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 SIRPDQ9H106 197 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 TMEM38AQ9H6F2 299 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 MEPEQ9NQ76 525 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 SDR39U1Q9NRG7 319 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 SLC25A37Q9NYZ2 338 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 CPSF4LA6NMK7 179 aaKnown RBP6.97□□□□□ -1.29
SCFD1-202ENST00000396629 KPNA4O00629 521 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-202ENST00000396629 HDAC3O15379 428 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 NR2C1P13056 603 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 RAC2P15153 192 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 SRP9P49458 86 aaKnown RBP6.97□□□□□ -1.29
SCFD1-202ENST00000396629 GUCY1A3Q02108 690 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 LRIF1Q5T3J3 769 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 SLC2A7Q6PXP3 512 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 VASH1Q7L8A9 365 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-202ENST00000396629 MOGAT3Q86VF5 341 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 TSPYL5Q86VY4 417 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-202ENST00000396629 C1orf87Q8N0U7 546 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 GALNT4Q8N4A0 578 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 OR8G5Q8NG78 346 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 OR6T1Q8NGN1 323 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 OR9I1Q8NGQ6 314 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 OR13G1Q8NGZ3 307 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 ADAMTS16Q8TE57 1224 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 MAELQ96JY0 434 aaKnown RBP6.97□□□□□ -1.29
SCFD1-202ENST00000396629 COG8Q96MW5 612 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 PRSS27Q9BQR3 290 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 WACQ9BTA9 647 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 ALG12Q9BV10 488 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 FBLN5Q9UBX5 448 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 SLC7A7Q9UM01 511 aa6.97□□□□□ -1.29
SCFD1-202ENST00000396629 A0A1B0GWJ7 208 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 TRAPPC13A5PLN9 417 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 LRRC30A6NM36 301 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 TRPC5OSA6NMA1 111 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 OR7A10O76100 309 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 FUT1P19526 365 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 SLC6A2P23975 617 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 TGFBR2P37173 567 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 AQP2P41181 271 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 CD47Q08722 323 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 COX10Q12887 443 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 DUSP7Q16829 419 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 OXLD1Q5BKU9 147 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 NXNQ6DKJ4 435 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 Q6ZTK2 550 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 OR5AS1Q8N127 324 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 GPR32P1Q8NGA4 272 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 OR10AD1Q8NGE0 317 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 OR4D11Q8NGI4 311 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 MOSPD2Q8NHP6 518 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 LIPHQ8WWY8 451 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.96□□□□□ -1.29
SCFD1-202ENST00000396629 CFHR4Q92496 578 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 LHX4Q969G2 390 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 TXNIPQ9H3M7 391 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 VPREB3Q9UKI3 123 aa6.96□□□□□ -1.29
SCFD1-202ENST00000396629 C12orf71A8MTZ7 269 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 MLNRO43193 412 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 IGF2P01344 180 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 SCG5P05408 212 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 MSR1P21757 451 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 PPIBP23284 216 aaKnown RBP6.96□□□□□ -1.3
SCFD1-202ENST00000396629 AQP1P29972 269 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 GATA4P43694 442 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 METTL11BQ5VVY1 283 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 SLC35E4Q6ICL7 350 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 FBXW12Q6X9E4 464 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 RBM45Q8IUH3 476 aaKnown RBP6.96□□□□□ -1.3
SCFD1-202ENST00000396629 SLC30A8Q8IWU4 369 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 PNLDC1Q8NA58 520 aaKnown RBP6.96□□□□□ -1.3
SCFD1-202ENST00000396629 SMYD1Q8NB12 490 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 PCYOX1LQ8NBM8 494 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 SCCPDHQ8NBX0 429 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 FNDC8Q8TC99 324 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 Q8TCH9 128 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 RBP7Q96R05 134 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 PCDHAC1Q9H158 963 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 SSU72Q9NP77 194 aaKnown RBP6.96□□□□□ -1.3
SCFD1-202ENST00000396629 SLAMF8Q9P0V8 285 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 CTSZQ9UBR2 303 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 USH1CQ9Y6N9 552 aa6.96□□□□□ -1.3
SCFD1-202ENST00000396629 TRBV5-3A0A0A0MS03 114 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 F5H5P2 479 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms