RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 S1PR1P21453 382 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 NME2P22392 152 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 HOXA1P49639 335 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-203ENST00000395060 OR2F1Q13607 317 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 MPPED2Q15777 294 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 GALNTL5Q7Z4T8 443 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 OR4D6Q8NGJ1 314 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 OR4A4PQ8NGN8 299 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 OR2I1PQ8NGU4 316 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 FLVCR1-AS1Q8TAF5 88 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 FOXRED1Q96CU9 486 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-203ENST00000395060 CHMP1AQ9HD42 196 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-203ENST00000395060 MED19A0JLT2 244 aaPredicted RBP12.87□□□□□ -0.35
CLIP2-203ENST00000395060 PRSS44E7EML9 344 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 K7EQS6 105 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 STK17BO94768 372 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 AK1P00568 194 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 ELOCQ15369 112 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 ELAVL1Q15717 326 aaKnown RBP12.87□□□□□ -0.35
CLIP2-203ENST00000395060 ZNF585AQ6P3V2 769 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 ZNF595Q8IYB9 648 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 FAM160A2Q8N612 972 aaPredicted RBP12.87□□□□□ -0.35
CLIP2-203ENST00000395060 OR5AP2Q8NGF4 316 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 OR5T2Q8NGG2 359 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 METTL21AQ8WXB1 218 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 MCHR2Q969V1 340 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 VSTM2LQ96N03 204 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 CNTNAP3BQ96NU0 1288 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 RTN4RQ9BZR6 473 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 BIN3Q9NQY0 253 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 COA4Q9NYJ1 87 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 DAOP14920 347 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 NPY4RP50391 375 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 S100A10P60903 97 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 ZP2Q05996 745 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 ZNF528Q3MIS6 628 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 RNF144BQ7Z419 303 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 OR4K17Q8NGC6 315 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 FGF14Q92915 247 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 ISOC2Q96AB3 205 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 SLC22A18Q96BI1 424 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 CTHRC1Q96CG8 243 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 UQCC2Q9BRT2 126 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 MRI1Q9BV20 369 aa12.87□□□□□ -0.35
CLIP2-203ENST00000395060 P2RY10O00398 339 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 HCRTR2O43614 444 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 IFNA6P05013 189 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 ZNF735P0CB33 412 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 PTGFRP43088 359 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 GFOD2Q3B7J2 385 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 PARM1Q6UWI2 310 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 CLEC9AQ6UXN8 241 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 MAFIPQ8WZ33 124 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 RSC1A1Q92681 617 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 ZC3H10Q96K80 434 aaKnown RBP12.86□□□□□ -0.35
CLIP2-203ENST00000395060 SMIM3Q9BZL3 60 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 PNO1Q9NRX1 252 aaKnown RBP12.86□□□□□ -0.35
CLIP2-203ENST00000395060 SPAG17Q6Q759 2223 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 C9orf170A2RU37 121 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 HTR3BO95264 441 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 PPT1P50897 306 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 RASGEF1BQ0VAM2 473 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 ASB5Q8WWX0 329 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 DGAT2Q96PD7 388 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 GAS2L1Q99501 681 aaPredicted RBP12.86□□□□□ -0.35
CLIP2-203ENST00000395060 PHB2Q99623 299 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 OR8D2Q9GZM6 311 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 GDE1Q9NZC3 331 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 HEBP2Q9Y5Z4 205 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 ICOSLGO75144 302 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 CD1AP06126 327 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 CD2P06729 351 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 SLC35E2P0CK97 266 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 RCC1P18754 421 aaPredicted RBP12.86□□□□□ -0.35
CLIP2-203ENST00000395060 FCARP24071 287 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 RPS4XP62701 263 aaKnown RBP12.86□□□□□ -0.35
CLIP2-203ENST00000395060 SLC17A1Q14916 467 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 OTOSQ8NHW6 89 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 RPS4Y2Q8TD47 263 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 GPR119Q8TDV5 335 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 SLC25A21Q9BQT8 299 aaPredicted RBP12.86□□□□□ -0.35
CLIP2-203ENST00000395060 RSRP1Q9BUV0 290 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 OR11A1Q9GZK7 315 aa12.86□□□□□ -0.35
CLIP2-203ENST00000395060 MRPS33Q9Y291 106 aaKnown RBP12.86□□□□□ -0.35
CLIP2-203ENST00000395060 YBX2Q9Y2T7 364 aaKnown RBP12.86□□□□□ -0.35
CLIP2-203ENST00000395060 RP1P56715 2156 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 C2orf72A6NCS6 295 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 TXNL1O43396 289 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 CTLA4P16410 223 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 RFC3P40938 356 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 FMODQ06828 376 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 COX15Q7KZN9 410 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 LYG2Q86SG7 212 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 OR51F2Q8NH61 342 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 ARL11Q969Q4 196 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 MRGPRFQ96AM1 343 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 C14orf79Q96F83 325 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 OR10A5Q9H207 317 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 LYRM4Q9HD34 91 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms