RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 FAM74A3Q4VXF1 159 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 ACTBL2Q562R1 376 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 C19orf47Q8N9M1 422 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR6K3Q8NGY3 331 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 GLYATL2Q8WU03 294 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 RSC1A1Q92681 617 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 AKR1E2Q96JD6 320 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 LCORQ96JN0 433 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 MAP3K3Q99759 626 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 DHCR7Q9UBM7 475 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 RBBP6Q7Z6E9 1792 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 RP1P56715 2156 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 SCN4AP35499 1836 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 CTSVO60911 334 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 RPA2P15927 270 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 RABIFP47224 123 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 RIN1Q13671 783 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 CA13Q8N1Q1 262 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR4D10Q8NGI6 311 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 TGIF2Q9GZN2 237 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC22A11Q9NSA0 550 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 GFOD1Q9NXC2 390 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF230Q9UIE0 474 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 LRP3O75074 770 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 AKR7A3O95154 331 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 LCATP04180 440 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 FCGR2AP12318 317 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 NQO2P16083 231 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 CASRP41180 1078 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 IGSF11Q5DX21 431 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 VN1R4Q7Z5H5 301 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZAR1Q86SH2 424 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 TMEM229BQ8NBD8 167 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 FAM174AQ8TBP5 190 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR5B12Q96R08 314 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 DEFB126Q9BYW3 111 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF304Q9HCX3 659 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 FLRT3Q9NZU0 649 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 ATG2BQ96BY7 2078 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 H7C1Q1 480 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 WNT11O96014 354 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 ITGB2P05107 769 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 JMJD7P0C870 316 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 ENPP1P22413 925 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 CX3CR1P49238 355 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 HMGN3Q15651 99 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 C1orf140Q5VVS0 124 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 RAET1LQ5VY80 246 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 WDR88Q6ZMY6 472 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC37A2Q8TED4 501 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 MS4A3Q96HJ5 214 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 CLCC1Q96S66 551 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 LPAR4Q99677 370 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 ST6GALNAC2Q9UJ37 374 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 MRPS2Q9Y399 296 aaKnown RBP11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 TRAV8-7A0A075B6U6 113 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 TMEM218A2RU14 115 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 TSTD3H0UI37 97 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 BET1O15155 118 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 MEOX2P50222 304 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF84P51523 738 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 POLR2HP52434 150 aaKnown RBP11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 UBXN2BQ14CS0 331 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 SUMF1Q8NBK3 374 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 HAS2Q92819 552 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 KTI12Q96EK9 354 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 BORCS8Q96FH0 119 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 TPSD1Q9BZJ3 242 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 HAO2Q9NYQ3 351 aa11.9□□□□□ -0.5
TRAPPC9-201ENST00000389328 TRAPPC6AO75865 159 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 CT62P0C5K7 136 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 VSIG10L2P0DP72 767 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 ST6GAL1P15907 406 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 FCGR2CP31995 323 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 PHLDA2Q53GA4 152 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR9K2Q8NGE7 335 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR51E1Q8TCB6 317 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 C4orf45Q96LM5 186 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 ABHD6Q9BV23 337 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 TEX101Q9BY14 249 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR10A2Q9H208 303 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 DNAJB12Q9NXW2 375 aaKnown RBP11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 SERGEFQ9UGK8 458 aa11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 MRM2Q9UI43 246 aaKnown RBP11.9□□□□□ -0.51
TRAPPC9-201ENST00000389328 TMEM272A0A1B0GTI8 110 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 TMEM229AB2RXF0 380 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 UMAD1C9J7I0 102 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 ARPC3O15145 178 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 LILRB3O75022 631 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZNF136P52737 540 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 OGFOD3Q6PK18 319 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 UQCC3Q6UW78 93 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 CPEB2Q7Z5Q1 589 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 CCDC71LQ8N9Z2 235 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 TXNDC12O95881 172 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 S100A8P05109 93 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 MFGE8Q08431 387 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 IL10RAQ13651 578 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 MPPED2Q15777 294 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms