RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SYNGR3O43761 229 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 TLX2O43763 284 aaPredicted RBP13.95□□□□□ -0.18
SNRPB-201ENST00000381342 DANCRP0C864 163 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 FAM157BP0CG42 384 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 NR4A1P22736 598 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 GSTT1P30711 240 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 PTH2RP49190 550 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 ENTPD1P49961 510 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 GDI2P50395 445 aaKnown RBP13.95□□□□□ -0.18
SNRPB-201ENST00000381342 FABP6P51161 128 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 ATP5J2P56134 94 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 HIST1H3AP68431 136 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 GALK2Q01415 458 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 RAB35Q15286 201 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 HIST2H3PS2Q5TEC6 136 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 TMEM154Q6P9G4 183 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 HIST2H3AQ71DI3 136 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 BIVMQ86UB2 503 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 ERI1Q8IV48 349 aaKnown RBP13.95□□□□□ -0.18
SNRPB-201ENST00000381342 GALNT4Q8N4A0 578 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 GJC3Q8NFK1 279 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 OR1J2Q8NGS2 313 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 OR2AJ1Q8NGZ0 328 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 FAM81AQ8TBF8 368 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 TMEM163Q8TC26 289 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 SLC7A6Q92536 515 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 C18orf12Q96KH6 178 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 INTS14Q96SY0 518 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 CDADC1Q9BWV3 514 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 DCLRE1BQ9H816 532 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 NKX1-2Q9UD57 310 aaPredicted RBP13.95□□□□□ -0.18
SNRPB-201ENST00000381342 KCNG2Q9UJ96 466 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 AKAP9Q99996 3911 aa13.95□□□□□ -0.18
SNRPB-201ENST00000381342 OR6C6A6NF89 314 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 E9PQ18 207 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 SELENOFO60613 162 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 COX5BP10606 129 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 THBS4P35443 961 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 WNT5AP41221 380 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 NAA10P41227 235 aaPredicted RBP13.94□□□□□ -0.18
SNRPB-201ENST00000381342 BLVRAP53004 296 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 EFNB1P98172 346 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 ADIPOQQ15848 244 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 ZNF544Q6NX49 715 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 FBXL14Q8N1E6 418 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 OR6N2Q8NGY6 317 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 IGFBPL1Q8WX77 278 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 MAP6Q96JE9 813 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 HRASLS5Q96KN8 279 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 Q96MF0 132 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 HDHD2Q9H0R4 259 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 MARCH7Q9H992 704 aa13.94□□□□□ -0.18
SNRPB-201ENST00000381342 NDRG4Q9ULP0 352 aaKnown RBP13.94□□□□□ -0.18
SNRPB-201ENST00000381342 RTTNQ86VV8 2226 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 TEP1Q99973 2627 aaKnown RBP13.93□□□□□ -0.18
SNRPB-201ENST00000381342 ZNF593O00488 134 aaPredicted RBP13.93□□□□□ -0.18
SNRPB-201ENST00000381342 DLGAP1O14490 977 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 CASQ2O14958 399 aaPredicted RBP13.93□□□□□ -0.18
SNRPB-201ENST00000381342 CD8AP01732 235 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 DBHP09172 617 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 TTKP33981 857 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 CDC42P60953 191 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 ERVS71-1P61550 626 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 MSMPQ1L6U9 139 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 SLC35D3Q5M8T2 416 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 ELFN2Q5R3F8 820 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 OGFRL1Q5TC84 451 aaPredicted RBP13.93□□□□□ -0.18
SNRPB-201ENST00000381342 AADACL4Q5VUY2 407 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 AGAP6Q5VW22 663 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 RFPL4BQ6ZWI9 263 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 DCXRQ7Z4W1 244 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 DTX2Q86UW9 622 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 TIGD4Q8IY51 512 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 ZNF101Q8IZC7 436 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 MUC15Q8N387 334 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 OR10S1Q8NGN2 331 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 OR1F12Q8NHA8 337 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 PITX2Q99697 317 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 TRAF4Q9BUZ4 470 aaPredicted RBP13.93□□□□□ -0.18
SNRPB-201ENST00000381342 ZNF442Q9H7R0 627 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 PNRC2Q9NPJ4 139 aaKnown RBP13.93□□□□□ -0.18
SNRPB-201ENST00000381342 IMPAD1Q9NX62 359 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 SMPD3Q9NY59 655 aaPredicted RBP13.93□□□□□ -0.18
SNRPB-201ENST00000381342 ATPIF1Q9UII2 106 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 SPEF1Q9Y4P9 236 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 HIVEP1P15822 2718 aa13.93□□□□□ -0.18
SNRPB-201ENST00000381342 MRPL3P09001 348 aaKnown RBP13.92□□□□□ -0.18
SNRPB-201ENST00000381342 INHBBP09529 407 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 OR4A8P0C604 315 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 APOBEC3AP31941 199 aaPredicted RBP13.92□□□□□ -0.18
SNRPB-201ENST00000381342 EIF2B1Q14232 305 aaKnown RBP13.92□□□□□ -0.18
SNRPB-201ENST00000381342 PCK2Q16822 640 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 LCN1P1Q5VSP4 162 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 NXNL2Q5VZ03 156 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 C11orf71Q6IPW1 123 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 DPY19L4Q7Z388 723 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 COQ7Q99807 217 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 ATF6BQ99941 703 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 RNPEPL1Q9HAU8 725 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 ZNF701Q9NV72 531 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms