RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 GIFP27352 417 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 ERFP50548 548 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 TEKQ02763 1124 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 MICAQ29983 383 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 PCGF3Q3KNV8 242 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 KRTAP21-3Q3LHN1 58 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 CHRFAM7AQ494W8 412 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 CCDC92Q53HC0 331 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 MBNL2Q5VZF2 373 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 FAM166AQ6J272 317 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 PGM2L1Q6PCE3 622 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 CORO6Q6QEF8 472 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 SPATA24Q86W54 205 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 OR6V1Q8N148 313 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 CYB561A3Q8NBI2 242 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 NPEPL1Q8NDH3 523 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 PROKR2Q8NFJ6 384 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 OR10G2Q8NGC3 310 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 OR2AJ1Q8NGZ0 328 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 OR1F12Q8NHA8 337 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 POP5Q969H6 163 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 YIPF5Q969M3 257 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 MSI2Q96DH6 328 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 CHID1Q9BWS9 393 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 TSSK6Q9BXA6 273 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 PLA2G12AQ9BZM1 189 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 SAP30LQ9HAJ7 183 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 ZNF275Q9NSD4 429 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 VNN3Q9NY84 501 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 METRNQ9UJH8 293 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 ZANQ9Y493 2812 aa9.88□□□□□ -0.83
SMARCE1-203ENST00000377808 NSD1Q96L73 2696 aaPredicted RBP9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 IGLV1-36A0A0B4J1U3 117 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 IGHV1-69-2A0A0G2JMI3 117 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 DHRS12A0PJE2 317 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 OR6C68A6NDL8 312 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 IDH3BO43837 385 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 LMX1BO60663 402 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 TGFAP01135 160 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 DBHP09172 617 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 IL2RGP31785 369 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 PYCR1P32322 319 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 HMGA2P52926 109 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 TRAP1Q12931 704 aaKnown RBP9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 RIN1Q13671 783 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 FLOT2Q14254 428 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 SLC36A3Q495N2 470 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 RASSF6Q6ZTQ3 369 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 USP51Q70EK9 711 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 PRIMA1Q86XR5 153 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 C1orf174Q8IYL3 243 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 GJC3Q8NFK1 279 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 PITX2Q99697 317 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 BEX2Q9BXY8 128 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 SHARPINQ9H0F6 387 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 RACGAP1Q9H0H5 632 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 POFUT1Q9H488 388 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 MSL2Q9HCI7 577 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 ARMC1Q9NVT9 282 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 TREM2Q9NZC2 230 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 PTTG3PQ9NZH4 202 aa9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 NIPBLQ6KC79 2804 aaeCLIP9.87□□□□□ -0.83
SMARCE1-203ENST00000377808 OR6C6A6NF89 314 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 TVP23AA6NH52 213 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 KIAA1324LA8MWY0 1029 aaPredicted RBP9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 H3BN98 237 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 ACOT8O14734 319 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 LILRA1O75019 489 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 E2F6O75461 281 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 IGHV1-46P01743 117 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 TACSTD2P09758 323 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 ZNF823P16415 610 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 ZMAT1Q5H9K5 638 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 TMEM255AQ5JRV8 349 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 AVPI1Q5T686 147 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 ZNF770Q6IQ21 691 aaPredicted RBP9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 IL17RELQ6ZVW7 336 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 ZNF771Q7L3S4 317 aaPredicted RBP9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 ADGRG5Q8IZF4 528 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 OR5AS1Q8N127 324 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 OR2T33Q8NG76 320 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 OR51L1Q8NGJ5 315 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 OR8D4Q8NGM9 314 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 OR9Q1Q8NGQ5 310 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 TEX47Q8TBZ9 253 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 CANT1Q8WVQ1 401 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 OTULINQ96BN8 352 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 CMBLQ96DG6 245 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 COG8Q96MW5 612 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 SOX7Q9BT81 388 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 EGLN1Q9GZT9 426 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 HDHD2Q9H0R4 259 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 LPAR2Q9HBW0 351 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 CYSLTR2Q9NS75 346 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 TBCCD1Q9NVR7 557 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 CDC42EP3Q9UKI2 254 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 STARD10Q9Y365 291 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 LHFPL6Q9Y693 200 aa9.86□□□□□ -0.83
SMARCE1-203ENST00000377808 SVEP1Q4LDE5 3571 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms