RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FOLR1P15328 257 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 UBE2KP61086 200 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SLC17A1Q14916 467 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM71Q6P5X7 295 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SLC22A25Q6T423 547 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 OR2AK2Q8NG84 335 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 OR52H1Q8NGJ2 320 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 ZPLD1Q8TCW7 415 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 FGF14Q92915 247 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 FAM86C1Q9NVL1 165 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 FAM186AA6NE01 2351 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 HRKO00198 91 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SIGLEC5O15389 551 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 BCL2L11O43521 198 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 FGF9P31371 208 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 GFERP55789 205 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 EGR3Q06889 387 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SIGLEC14Q08ET2 396 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 H3F3CQ6NXT2 135 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 PBOV1Q9GZY1 135 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 WASF3Q9UPY6 502 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 LRP12Q9Y561 859 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SIRT4Q9Y6E7 314 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 OR6C65A6NJZ3 312 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 OR6C76A6NM76 312 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 BHLHE40O14503 412 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 RGS13O14921 159 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 XRCC3O43542 346 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 PLPP2O43688 288 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 GLI4P10075 376 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 CPT2P23786 658 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 PLP2Q04941 152 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 IAH1Q2TAA2 248 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 PRICKLE4Q2TBC4 344 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 ACTBL2Q562R1 376 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 EID2Q8N6I1 236 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 ZFP62Q8NB50 900 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 ATOH1Q92858 354 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 CA10Q9NS85 328 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 TAS2R5Q9NYW4 299 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 TRIM64A6NGJ6 449 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 GJE1A6NN92 205 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 C4orf47A7E2U8 309 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 A8MVM7 634 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 CBX7O95931 251 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 TGM6O95932 706 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 ASCL1P50553 236 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 ATP1B3P54709 279 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 PAN3Q58A45 887 aaKnown RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 CD300LDQ6UXZ3 194 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 NKAIN3Q8N8D7 197 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 OR2G2Q8NGZ5 317 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 CDCA3Q99618 268 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 A0A1W2PNR3 127 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF705GA8MUZ8 300 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 GLSO94925 669 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 TMIGD3P0DMS9 266 aaPredicted RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 ABOP16442 354 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 MAP2K6P52564 334 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 FMODQ06828 376 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 RIPPLY1Q0D2K3 151 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 CAMK2BQ13554 666 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 EIF2S3LQ2VIR3 472 aaKnown RBP5.93□□□□□ -1.46
SMC1A-202ENST00000375340 LYG2Q86SG7 212 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 TMEM200AQ86VY9 491 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 SYT3Q9BQG1 590 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 NMNAT2Q9BZQ4 307 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 S1PR5Q9H228 398 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 R4GMQ9 66 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 ATG2BQ96BY7 2078 aa5.93□□□□□ -1.46
SMC1A-202ENST00000375340 MED19A0JLT2 244 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 A6NLC8 198 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 DCTN6O00399 190 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ANKRD34CP0C6C1 535 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 NAT1P18440 290 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PEBP1P30086 187 aaKnown RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 DCAF7P61962 342 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 STK11Q15831 433 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 SEZ6L2Q6UXD5 910 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 H1FNTQ75WM6 255 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 SYS1Q8N2H4 156 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 C8orf44Q96CB5 159 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PELI1Q96FA3 418 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZNF2Q9BSG1 426 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 CHST11Q9NPF2 352 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PRMT8Q9NR22 394 aaPredicted RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 PLXNA3P51805 1871 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 MPZL1O95297 269 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 RAC2P15153 192 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 CDKN2AP42771 156 aaKnown RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 IKZF1Q13422 519 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 WDR38Q5JTN6 314 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.92□□□□□ -1.46
SMC1A-202ENST00000375340 SLC43A2Q8N370 569 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 OR10Z1Q8NGY1 313 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 SSX3Q99909 188 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 YPEL5P62699 121 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 WDR88Q6ZMY6 472 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 HSD17B11Q8NBQ5 300 aa5.92□□□□□ -1.46
SMC1A-202ENST00000375340 SNIP1Q8TAD8 396 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms