RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ZNF385AQ96PM9 386 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 SIGLEC12Q96PQ1 595 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ABHD1Q96SE0 405 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ABCG5Q9H222 651 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 MOB1AQ9H8S9 216 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 EMC7Q9NPA0 242 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CENPMQ9NSP4 180 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 FOXD3Q9UJU5 478 aaPredicted RBP15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 POLR1DQ9Y2S0 133 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 EIF1AYO14602 144 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CTDSPLO15194 276 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 PRKAR1AP10644 381 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 IGFBP3P17936 291 aaPredicted RBP15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CDAP32320 146 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 MMP15P51511 669 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 OR1C1Q15619 314 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 WIPI1Q5MNZ9 446 aaPredicted RBP15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 BCL2L15Q5TBC7 163 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ABLIM2Q6H8Q1 611 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ASPHD2Q6ICH7 369 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 MZT2BQ6NZ67 158 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CFAP77Q6ZQR2 320 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CLEC1AQ8NC01 280 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 OR6N1Q8NGY5 312 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 OR2V1Q8NHB1 315 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 SLC25A38Q96DW6 304 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ZNF703Q9H7S9 590 aaPredicted RBP15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 RBFOX1Q9NWB1 397 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 B4GALT7Q9UBV7 327 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 OR5V1Q9UGF6 321 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 RCE1Q9Y256 329 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 SPAARA0A1B0GVQ0 90 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 LINC00854A0A1B0GVQ3 168 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 LOC107986453A0A1B0GWG9 222 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 TRAPPC6AO75865 159 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 HPNP05981 417 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CD37P11049 281 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 POU3F2P20265 443 aaPredicted RBP15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CSRP1P21291 193 aaKnown RBP15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 INPP1P49441 399 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CARD18P57730 90 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 PSMA6P60900 246 aaKnown RBP15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CMTM4Q8IZR5 234 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 RAB40AQ8WXH6 277 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ITPKCQ96DU7 683 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 THAP7Q9BT49 309 aaPredicted RBP15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 GVINP1Q7Z2Y8 2422 aa15.94■□□□□ 0.14
HLA-DQB1-201ENST00000374943 H0YC42 278 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 BOLA2-SMG1P6H3BVE0 249 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 LYRM1O43325 122 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 GSTZ1O43708 216 aaPredicted RBP15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 WDPCPO95876 746 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 F10P00742 488 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 MAS1P04201 325 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 MSR1P21757 451 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 RANBP1P43487 201 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 C20orf196Q8IYI0 205 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ELMOD2Q8IZ81 293 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 DNAAF1Q8NEP3 725 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 NELFAQ9H3P2 528 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 PNRC2Q9NPJ4 139 aaKnown RBP15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 NPAP1Q9NZP6 1156 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CKLFQ9UBR5 152 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 STEAP1Q9UHE8 339 aa15.93■□□□□ 0.14
HLA-DQB1-201ENST00000374943 A0A1B0GVC2 190 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 A6NIN4 97 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ZNF716A6NP11 495 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 TPPPO94811 219 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 FAM157BP0CG42 384 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 MNDAP41218 407 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 KIR2DL3P43628 341 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 EIF1AXP47813 144 aaKnown RBP15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 PHYHD1Q5SRE7 291 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 IGF2-ASQ6U949 168 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 FCRLAQ7L513 359 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 DUSP18Q8NEJ0 188 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 OR10D3Q8NH80 312 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ENKURQ8TC29 256 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 HDHD2Q9H0R4 259 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ASH2LQ9UBL3 628 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 NUFIP1Q9UHK0 495 aaKnown RBP15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CLEC4AQ9UMR7 237 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 FLVCR1Q9Y5Y0 555 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 H3BSH0 61 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 DHHO43323 396 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CXCL13O43927 109 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 TTRP02766 147 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ACSM4P0C7M7 580 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 SELENOPP49908 381 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CLDN15P56746 228 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CLDN12P56749 244 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 SOX8P57073 446 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 EP300Q09472 2414 aaPredicted RBP15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 PDSS1Q5T2R2 415 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 FAM166AQ6J272 317 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 SULF2Q8IWU5 870 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 UBQLNLQ8IYU4 475 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 DTX3Q8N9I9 347 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 MDS2Q8NDY4 140 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 OR13C3Q8NGS6 347 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms