RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 MOGAT2Q3SYC2 334 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 CT45A2Q5DJT8 189 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 ASPHD2Q6ICH7 369 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 UQCC3Q6UW78 93 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 ACBD4Q8NC06 268 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 C16orf52Q8NHV5 167 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 ZNF563Q8TA94 476 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 HOXB13Q92826 284 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-203ENST00000374877 SLC41A2Q96JW4 573 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 TMEM231Q9H6L2 316 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 VSIG4Q9Y279 399 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 A0A0A6YYC8 382 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-203ENST00000374877 OR5K4A6NMS3 321 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 TGFBR3LH3BV60 316 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 I3L1I5 382 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-203ENST00000374877 SULT2B1O00204 365 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 CD2P06729 351 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 MELTFP08582 738 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 ZNF735P0CB33 412 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 PNMTP11086 282 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 RAB13P51153 203 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 IL13RA1P78552 427 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 SPOCK1Q08629 439 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 PMPCAQ10713 525 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 RNASE10Q5GAN6 216 aaKnown RBP9.97□□□□□ -0.81
CCDC40-203ENST00000374877 EEF1A1P5Q5VTE0 462 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 PAPD4Q6PIY7 484 aaKnown RBP9.97□□□□□ -0.81
CCDC40-203ENST00000374877 ATG4DQ86TL0 474 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-203ENST00000374877 SFTPA2Q8IWL1 248 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 OTOSQ8NHW6 89 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 CST11Q9H112 138 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 TREM1Q9NP99 234 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 SLC17A5Q9NRA2 495 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 KLK13Q9UKR3 277 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 KCNK7Q9Y2U2 307 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 C13orf42A0A1B0GVH6 325 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 C5orf51A6NDU8 294 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 SULT1C2O00338 296 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 XKRYO14609 159 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 EGR4Q05215 589 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 SLC17A1Q14916 467 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 VWA2Q5GFL6 755 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 H3F3CQ6NXT2 135 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 OR51A2Q8NGJ7 313 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 C2CD4CQ8TF44 421 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 SLC25A44Q96H78 314 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-203ENST00000374877 DGAT2Q96PD7 388 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 OR8B4Q96RC9 309 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-203ENST00000374877 IFT22Q9H7X7 185 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 ZNF629Q9UEG4 869 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-203ENST00000374877 MRPS18BQ9Y676 258 aaKnown RBP9.96□□□□□ -0.81
CCDC40-203ENST00000374877 RAB19A4D1S5 217 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 OR6C76A6NM76 312 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 C2orf74A8MZ97 194 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 FOXS1O43638 330 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 ACTL6AO96019 429 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 ASAH2BP0C7U1 165 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 CD96P40200 585 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 BTG2P78543 158 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 ELOCQ15369 112 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 INPP5JQ15735 1006 aaPredicted RBP9.96□□□□□ -0.81
CCDC40-203ENST00000374877 MDGA2Q7Z553 956 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 THRSPQ92748 146 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 ESRP2Q9H6T0 727 aaKnown RBP9.96□□□□□ -0.81
CCDC40-203ENST00000374877 SCPEP1Q9HB40 452 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 CYB5R1Q9UHQ9 305 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 MKL2Q9ULH7 1088 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 TMED7Q9Y3B3 224 aa9.96□□□□□ -0.81
CCDC40-203ENST00000374877 LRP4O75096 1905 aa9.96□□□□□ -0.82
CCDC40-203ENST00000374877 TMEM200CA6NKL6 621 aa9.96□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF208O43345 1280 aa9.96□□□□□ -0.82
CCDC40-203ENST00000374877 PGAM2P15259 253 aa9.96□□□□□ -0.82
CCDC40-203ENST00000374877 AKR1C4P17516 323 aa9.96□□□□□ -0.82
CCDC40-203ENST00000374877 SRSF3P84103 164 aaKnown RBP9.96□□□□□ -0.82
CCDC40-203ENST00000374877 MFGE8Q08431 387 aaPredicted RBP9.96□□□□□ -0.82
CCDC40-203ENST00000374877 BIKQ13323 160 aa9.96□□□□□ -0.82
CCDC40-203ENST00000374877 LYG2Q86SG7 212 aa9.96□□□□□ -0.82
CCDC40-203ENST00000374877 ZFP82Q8N141 532 aa9.96□□□□□ -0.82
CCDC40-203ENST00000374877 CHST4Q8NCG5 386 aa9.96□□□□□ -0.82
CCDC40-203ENST00000374877 LILRB1Q8NHL6 650 aaPredicted RBP9.96□□□□□ -0.82
CCDC40-203ENST00000374877 TWSG1Q9GZX9 223 aa9.96□□□□□ -0.82
CCDC40-203ENST00000374877 KIR2DS5A0A0G2JLQ3 304 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 A0A0G2JNG1 304 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 KIR2DS3K7RE56 304 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 PHYHO14832 338 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 NME1P15531 152 aaKnown RBP9.95□□□□□ -0.82
CCDC40-203ENST00000374877 BCKDHBP21953 392 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 RORAP35398 523 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 DNASE1L1P49184 302 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 KIR2DS5Q14953 304 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 PLEKHN1Q494U1 663 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-203ENST00000374877 OR52W1Q6IF63 320 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 FAM166AQ6J272 317 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 CORO6Q6QEF8 472 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 TAF8Q7Z7C8 310 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 ADGRE4PQ86SQ3 457 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 ASB5Q8WWX0 329 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 PHB2Q99623 299 aa9.95□□□□□ -0.82
CCDC40-203ENST00000374877 KLHDC3Q9BQ90 382 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms