RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 INTS14Q96SY0 518 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 TINAGL1Q9GZM7 467 aaPredicted RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 TSPAN10Q9H1Z9 355 aaPredicted RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 VSX1Q9NZR4 365 aaPredicted RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 LAMP5Q9UJQ1 280 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 NXT1Q9UKK6 140 aaKnown RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 FBXO4Q9UKT5 387 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 ZNF281Q9Y2X9 895 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 B3GALT1Q9Y5Z6 326 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 EFNA2O43921 213 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 EIF3GO75821 320 aaKnown RBP eCLIP11.47□□□□□ -0.57
GPC3-201ENST00000370818 ARL6IP5O75915 188 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 OR2A4O95047 310 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 RPP14O95059 124 aaKnown RBP11.47□□□□□ -0.57
GPC3-201ENST00000370818 CELA2AP08217 269 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 PPP3CBP16298 524 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 MAGEB1P43366 347 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 GK2Q14410 553 aaPredicted RBP11.47□□□□□ -0.57
GPC3-201ENST00000370818 SFRP4Q6FHJ7 346 aaPredicted RBP11.47□□□□□ -0.57
GPC3-201ENST00000370818 DTWD2Q8NBA8 298 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 SFT2D1Q8WV19 159 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 MR1Q95460 341 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 FOXN4Q96NZ1 517 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 OR2A7Q96R45 310 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 AMELYQ99218 206 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 DEFB126Q9BYW3 111 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 NOX4Q9NPH5 578 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 FRRS1LQ9P0K9 344 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 IGLV3-32A0A0A0MS00 114 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 IGLV1-36A0A0B4J1U3 117 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 A0A0B4J203 849 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 MS4A18H0YCH9 400 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 ATG12O94817 140 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 OR6A2O95222 327 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 KLK3P07288 261 aaPredicted RBP11.47□□□□□ -0.57
GPC3-201ENST00000370818 CTLA4P16410 223 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 ATF1P18846 271 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 CCKBRP32239 447 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 RAP2BP61225 183 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 MELKQ14680 651 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 MS4A18Q3C1V0 323 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 TMEM88Q6PEY1 159 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 FIP1L1Q6UN15 594 aaKnown RBP11.47□□□□□ -0.57
GPC3-201ENST00000370818 GSG1LQ6UXU4 331 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 DBX2Q6ZNG2 339 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 BPIFCQ8NFQ6 507 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 OR6S1Q8NH40 331 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 SPACA9Q96E40 222 aaPredicted RBP11.47□□□□□ -0.57
GPC3-201ENST00000370818 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 ULBP3Q9BZM4 244 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 ARL6Q9H0F7 186 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 PPP4R1LQ9P1A2 415 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 KCNG2Q9UJ96 466 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 WIF1Q9Y5W5 379 aa11.47□□□□□ -0.57
GPC3-201ENST00000370818 IGHV1-45A0A0A0MS14 117 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 A0A1B0GTH9 108 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 ACOD1A6NK06 481 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 ARPC5O15511 151 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 SGCEO43556 437 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 SLC16A7O60669 478 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 PRAF2O60831 178 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 IFNA4P05014 189 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 TACSTD2P09758 323 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 EPXP11678 715 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 RFC3P40938 356 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 KCNJ3P48549 501 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 VEGFCP49767 419 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 DYRK1AQ13627 763 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 OR7A5Q15622 319 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 TSC22D1Q15714 1073 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 PLPPR5Q32ZL2 321 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 METTL11BQ5VVY1 283 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 MTFR2Q6P444 385 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 FAM220AQ7Z4H9 259 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 WDFY1Q8IWB7 410 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 MFSD8Q8NHS3 518 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 OTOSQ8NHW6 89 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 TRMT10AQ8TBZ6 339 aaKnown RBP11.46□□□□□ -0.57
GPC3-201ENST00000370818 HAVCR2Q8TDQ0 301 aa11.46□□□□□ -0.57
GPC3-201ENST00000370818 MRPL22Q9NWU5 206 aaKnown RBP11.46□□□□□ -0.57
GPC3-201ENST00000370818 PTRH2Q9Y3E5 179 aaKnown RBP11.46□□□□□ -0.57
GPC3-201ENST00000370818 CPAMD8Q8IZJ3 1885 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 HMSDA8MTL9 139 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 ZNF879B4DU55 563 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 FLRT2O43155 660 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 ZNF208O43345 1280 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 EIF1BO60739 113 aaKnown RBP11.46□□□□□ -0.58
GPC3-201ENST00000370818 UBL3O95164 117 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 ECDO95905 644 aaPredicted RBP11.46□□□□□ -0.58
GPC3-201ENST00000370818 COX6A1P12074 109 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 SRMP19623 302 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 EIF1P41567 113 aaKnown RBP11.46□□□□□ -0.58
GPC3-201ENST00000370818 PSMA6P60900 246 aaKnown RBP11.46□□□□□ -0.58
GPC3-201ENST00000370818 EGR3Q06889 387 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 ALKBH1Q13686 389 aaKnown RBP11.46□□□□□ -0.58
GPC3-201ENST00000370818 TMEM255AQ5JRV8 349 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 LRRC69Q6ZNQ3 347 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 PXT1Q8NFP0 134 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 POC1BQ8TC44 478 aa11.46□□□□□ -0.58
GPC3-201ENST00000370818 PHYHIPQ92561 330 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms