RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 B3GAT1Q9P2W7 334 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SPRR3Q9UBC9 169 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ZNF346Q9UL40 294 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 HDGFL3Q9Y3E1 203 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SPIN1Q9Y657 262 aaPredicted RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 POMT1Q9Y6A1 747 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 HSPE1-MOB4S4R3N1 261 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ATRXP46100 2492 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 IGHV3-15A0A0B4J1V0 119 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 KRTAP23-1A1A580 65 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 A1L4Q6 167 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 OR6C68A6NDL8 312 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 FAM183AA6NL82 134 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ARPC3O15145 178 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SEC14L5O43304 696 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 XPNPEP2O43895 674 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 CXCL13O43927 109 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 IGHG3P01860 377 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 HMGN1P05114 100 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ADRA2AP08913 450 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 HIST1H1CP16403 213 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 ZNF708P17019 499 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 IGFBP2P18065 325 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 S100A1P23297 94 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 AHCYP23526 432 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 CRHBPP24387 322 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 RPL4P36578 427 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 CDKN2AP42771 156 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 NUDT6P53370 316 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 CARD18P57730 90 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 PRPS1P60891 318 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SLC35A1P78382 337 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SRYQ05066 204 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 RUNX1T1Q06455 604 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ITGADQ13349 1161 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ALKBH1Q13686 389 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 MFSD13AQ14CX5 517 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ACKR1Q16570 336 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 C3AR1Q16581 482 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ZNF239Q16600 458 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 ANKDD1AQ495B1 522 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ALG10Q5BKT4 473 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SLC25A30Q5SVS4 291 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 AADACL4Q5VUY2 407 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 HBMQ6B0K9 141 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 PLXDC2Q6UX71 529 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 CASP12Q6UXS9 341 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 UBQLNLQ8IYU4 475 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 GHDCQ8N2G8 530 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ZIC4Q8N9L1 334 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SCAIQ8N9R8 606 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 CYB561A3Q8NBI2 242 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SLC37A3Q8NCC5 494 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 NPEPL1Q8NDH3 523 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 BPIFB6Q8NFQ5 453 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 OR52L1Q8NGH7 329 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 OR8J1Q8NGP2 316 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 OR4K13Q8NH42 304 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 OR10D3Q8NH80 312 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 NEIL3Q8TAT5 605 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ZNF519Q8TB69 540 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ZPLD1Q8TCW7 415 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 GLMPQ8WWB7 406 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ZNRF4Q8WWF5 429 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 TRUB1Q8WWH5 349 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 ROBO4Q8WZ75 1007 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 TM9SF4Q92544 642 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 GGHQ92820 318 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ABTB1Q969K4 478 aaPredicted RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 RASD2Q96D21 266 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ZNF582Q96NG8 517 aaPredicted RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 MNTQ99583 582 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 DPCDQ9BVM2 203 aaPredicted RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 TAPBPLQ9BX59 468 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 AMBNQ9NP70 447 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 FANCFQ9NPI8 374 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 HINT3Q9NQE9 182 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 CMC2Q9NRP2 79 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 INIPQ9NRY2 104 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 IMPAD1Q9NX62 359 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 DNAJC27Q9NZQ0 273 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 B3GNT3Q9Y2A9 372 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SESN1Q9Y6P5 492 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SVILO95425 2214 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 TRGV5A0A0B4J1U4 118 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 LOC102725191A0A1B0GVB3 256 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 GJE1A6NN92 205 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 KDM4EB2RXH2 506 aaPredicted RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 NPIPA5E9PKD4 350 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SLC1A7O00341 560 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 TFECO14948 347 aaPredicted RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 SMAD9O15198 467 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 RNF13O43567 381 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 TRAF3IP2O43734 574 aaPredicted RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 IDH3BO43837 385 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SERPINI2O75830 405 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 OR6A2O95222 327 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 GPANK1O95872 356 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 PLGP00747 810 aaPredicted RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 HTR1AP08908 422 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms