RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ZNF573Q86YE8 665 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 TAAR5O14804 337 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 CPEB3Q8NE35 698 aaKnown RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 PHYHIPQ92561 330 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 CHD3Q12873 2000 aaKnown RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 NDUFB7P17568 137 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 CDC34P49427 236 aaPredicted RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 FAM26DQ5JW98 314 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 RNASEK-C17orf49H0YIS7 233 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 SIGLEC6O43699 453 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 ADAM11O75078 769 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 LGI1O95970 557 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 GIPP09681 153 aaPredicted RBP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 BTG1P62324 171 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 PRTGQ2VWP7 1150 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 MANEAQ5SRI9 462 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 CXorf36Q9H7Y0 433 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 COL2A1P02458 1487 aaPredicted RBP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 ZNF814B7Z6K7 855 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 G3V3Y1 287 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 ABCD4O14678 606 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 SOD1P00441 154 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 CSNK1DP48730 415 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 DOC2BQ14184 412 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 C20orf27Q9GZN8 174 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 TMEM38AQ9H6F2 299 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 NTNG1Q9Y2I2 539 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 A0A1B0GWA3 101 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 OR2F2O95006 317 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 GLAP06280 429 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 CD14P08571 375 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 ATXN1LP0C7T5 689 aaKnown RBP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 PTBP1P26599 531 aaKnown RBP eCLIP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 TEAD1P28347 426 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 PSMB2P49721 201 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 OR2F1Q13607 317 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 RETREG3Q86VR2 466 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 FGF13Q92913 245 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 TWSG1Q9GZX9 223 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 PDGFBP01127 241 aaPredicted RBP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 SCGB1A1P11684 91 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 HOXC13P31276 330 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 OR51I2Q9H344 312 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 EPHX3Q9H6B9 360 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 LANCL2Q9NS86 450 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 GMPR2Q9P2T1 348 aaKnown RBP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 HOXD9P28356 352 aaPredicted RBP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 SPANXN5Q5MJ07 72 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 ZNF813Q6ZN06 617 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 UBAC2Q8NBM4 344 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 OR52N1Q8NH53 320 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 MBOAT4Q96T53 435 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 PLA2G12AQ9BZM1 189 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 TAS2R4Q9NYW5 299 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 CRYBG1Q9Y4K1 1723 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 TUBGCP6Q96RT7 1819 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 PRKRAO75569 313 aaKnown RBP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 IGHEP01854 428 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 RPS19P39019 145 aaKnown RBP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 OR10A3P58181 314 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 RPL24P83731 157 aaKnown RBP11.42□□□□□ -0.58
HCFC1-202ENST00000369984 H3F3AP84243 136 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 OR5I1Q13606 314 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 ACKR1Q16570 336 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 C9orf152Q5JTZ5 239 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 SLC7A6Q92536 515 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 BOD1Q96IK1 185 aa11.42□□□□□ -0.58
HCFC1-202ENST00000369984 M0QZ24 198 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 C1QBP02746 253 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 ACOT7LQ6ZUV0 252 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 AMIGO3Q86WK7 504 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 FPR3P25089 353 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 CXCL12P48061 93 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 IGSF11Q5DX21 431 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 OR5AS1Q8N127 324 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 UCN3Q969E3 161 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 INSM2Q96T92 566 aaPredicted RBP11.41□□□□□ -0.58
HCFC1-202ENST00000369984 TTRP02766 147 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 CALCBP10092 127 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 ALOX5APP20292 161 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 SULT1A2P50226 295 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 ENDOGQ14249 297 aaKnown RBP11.41□□□□□ -0.58
HCFC1-202ENST00000369984 RNF212Q495C1 297 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 MARCH3Q86UD3 253 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 TMEM123Q8N131 208 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 ST8SIA4Q92187 359 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 CHRDL1Q9BU40 450 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 B3GALT5Q9Y2C3 310 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 ABCA1O95477 2261 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 TRAV34A0A0B4J273 112 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 SLC5A10A0PJK1 596 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 UQCRFS1P47985 274 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 MLF2Q15773 248 aaPredicted RBP11.41□□□□□ -0.58
HCFC1-202ENST00000369984 CLEC12BQ2HXU8 276 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 TUSC5Q8IXB3 177 aa11.41□□□□□ -0.58
HCFC1-202ENST00000369984 TMEM102Q8N9M5 508 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms