RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 HBE1P02100 147 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 CPN1P15169 458 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 GIPRP48546 466 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 MFAP4P55083 255 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 TNFAIP6P98066 277 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-203ENST00000357654 TIGITQ495A1 244 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 MRPL2Q5T653 305 aaKnown RBP5.31□□□□□ -1.56
BRCA1-203ENST00000357654 CST9Q5W186 159 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 TMEM123Q8N131 208 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 LYG1Q8N1E2 194 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 PGBD5Q8N414 524 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 OR13C6PQ8NH95 151 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 TTC9Q92623 222 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 SPACA9Q96E40 222 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-203ENST00000357654 CCL19Q99731 98 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 SDR39U1Q9NRG7 319 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-203ENST00000357654 PAQR5Q9NXK6 330 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-203ENST00000357654 OR52A1Q9UKL2 312 aa5.31□□□□□ -1.56
BRCA1-203ENST00000357654 ZNF346Q9UL40 294 aaKnown RBP5.31□□□□□ -1.56
BRCA1-203ENST00000357654 TMEM72A0PK05 275 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SLC22A23A1A5C7 686 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 IMPA1P29218 277 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 TM4SF1P30408 202 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 G6PCP35575 357 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 LTBRP36941 435 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 DUSP6Q16828 381 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 ASTLQ6HA08 431 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 FDX2Q6P4F2 183 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 RFPL4BQ6ZWI9 263 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 MAML2Q8IZL2 1156 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 TMEM116Q8NCL8 245 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 NEIL2Q969S2 332 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 RSG1Q9BU20 258 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 DMRT3Q9NQL9 472 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CTSFQ9UBX1 484 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 PGAP2Q9UHJ9 254 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 VSIG4Q9Y279 399 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SPAARA0A1B0GVQ0 90 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 TRABD2BA6NFA1 517 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 H0Y8X5 98 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 M0R3E3 92 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 GFRA3O60609 400 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 IGKV3-20P01619 116 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CD82P27701 267 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 LIPAP38571 399 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 HAAOP46952 286 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 HAGHQ16775 308 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 HES3Q5TGS1 186 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 RNASEKQ6P5S7 137 aaKnown RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 LCN15Q6UWW0 184 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 MRPL43Q8N983 215 aaKnown RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 C2CD4AQ8NCU7 369 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 OR52L2PQ8NGH6 319 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 TMED6Q8WW62 240 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 RAB1CQ92928 201 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 FZD8Q9H461 694 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CYSLTR2Q9NS75 346 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 FBXO34Q9NWN3 711 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CACNG2Q9Y698 323 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 LINC01565O15544 149 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 HMGN2P05204 90 aaKnown RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 QDPRP09417 244 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 FGF7P21781 194 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CD27P26842 260 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CDK5Q00535 292 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 ACSM1Q08AH1 577 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 NRN1LQ496H8 165 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CLLU1OSQ5K130 101 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SLC36A1Q7Z2H8 476 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SIGLECL1Q8N7X8 197 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SLC26A10Q8NG04 563 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SLC22A12Q96S37 553 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SLCO5A1Q9H2Y9 848 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 TMEM231Q9H6L2 316 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SIRT3Q9NTG7 399 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SAGE1Q9NXZ1 904 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 BTNL2Q9UIR0 455 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 POLDIP2Q9Y2S7 368 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CCL27Q9Y4X3 112 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 TNFRSF1AP19438 455 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SUOXP51687 545 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 PRRX1P54821 245 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CLN3Q13286 438 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 MICBQ29980 383 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 ZNF181Q2M3W8 571 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 WIPI1Q5MNZ9 446 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 GLIPR1L1Q6UWM5 242 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 APOOLQ6UXV4 268 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 FCRLAQ7L513 359 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 RPUSD4Q96CM3 377 aaKnown RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 TAAR9Q96RI9 348 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 KCNK17Q96T54 332 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 PSD2Q9BQI7 771 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 C20orf85Q9H1P6 137 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 UCK1Q9HA47 277 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 NOX4Q9NPH5 578 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 RYDENQ9NUL5 291 aaKnown RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 MARCH5Q9NX47 278 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 OR1A1Q9P1Q5 309 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 AMMECR1Q9Y4X0 333 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms