RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 ZNF100Q8IYN0 542 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 PARD6GQ9BYG4 376 aaPredicted RBP11.59□□□□□ -0.55
COL6A3-203ENST00000353578 RAB6CQ9H0N0 254 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 CRYBG1Q9Y4K1 1723 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 SIAH2O43255 324 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 TCF21O43680 179 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 LRP3O75074 770 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 DBHP09172 617 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF157P51786 506 aaPredicted RBP11.59□□□□□ -0.55
COL6A3-203ENST00000353578 GRM7Q14831 915 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 CYB5R2Q6BCY4 276 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 CTDSPLO15194 276 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 CD200P41217 278 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 GSK3AP49840 483 aa11.59□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF761Q86XN6 746 aaPredicted RBP11.59□□□□□ -0.55
COL6A3-203ENST00000353578 SOD1P00441 154 aa11.58□□□□□ -0.55
COL6A3-203ENST00000353578 NPBWR2P48146 333 aa11.58□□□□□ -0.55
COL6A3-203ENST00000353578 HYAL2Q12891 473 aa11.58□□□□□ -0.55
COL6A3-203ENST00000353578 DACT2Q5SW24 774 aa11.58□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF626Q68DY1 528 aa11.58□□□□□ -0.55
COL6A3-203ENST00000353578 UBALD1Q8TB05 177 aa11.58□□□□□ -0.55
COL6A3-203ENST00000353578 FAM103A1Q9BTL3 118 aaKnown RBP11.58□□□□□ -0.55
COL6A3-203ENST00000353578 DLEC1Q9Y238 1755 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 RAD52P43351 418 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 GSG1Q2KHT4 349 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 DHRS13Q6UX07 377 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 SMOQ99835 787 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 PDE6DO43924 150 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 STC2O76061 302 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 PTNP21246 168 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 ADCYAP1R1P41586 468 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 XKR7Q5GH72 579 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 MEGF10Q96KG7 1140 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 OR14J1Q9UGF5 321 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 FLVCR1Q9Y5Y0 555 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 PIRO00625 290 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 AQP7O14520 342 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 ACAA1P09110 424 aaPredicted RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 ST6GAL1P15907 406 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 ZNF140P52738 457 aaPredicted RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 ZNF273Q14593 569 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 TTC32Q5I0X7 151 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 PSRC1Q6PGN9 363 aaPredicted RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 NPSR1Q6W5P4 371 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 ISG20Q96AZ6 181 aaKnown RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 EID2BQ96D98 161 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 STARD4Q96DR4 205 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 MRPS17Q9Y2R5 130 aaKnown RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 SSSCA1O60232 199 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 BRS3P32247 399 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 APLNRP35414 380 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 DGCR2P98153 550 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 TUSC1Q2TAM9 212 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 TMEM123Q8N131 208 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 IL22RA1Q8N6P7 574 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 DNMT3BQ9UBC3 853 aaKnown RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 CDC42EP3Q9UKI2 254 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 GPM6AP51674 278 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 FOXK2Q01167 660 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 DRAM2Q6UX65 266 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 TMEM64Q6YI46 380 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 CYB561A3Q8NBI2 242 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 ZNF593O00488 134 aaPredicted RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 FPR2P25090 351 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 BLVRBP30043 206 aaPredicted RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 H2BFWTQ7Z2G1 175 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 KMT2EQ8IZD2 1858 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 FCN1O00602 326 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 HRO43593 1189 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 LCATP04180 440 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 CD14P08571 375 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 ATXN1LP0C7T5 689 aaKnown RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 CSNK1G2P78368 415 aa11.58□□□□□ -0.56
COL6A3-203ENST00000353578 ZFP62Q8NB50 900 aaPredicted RBP11.58□□□□□ -0.56
COL6A3-203ENST00000353578 GLAP06280 429 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 KIR2DS3Q14952 304 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 AWAT1Q58HT5 328 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 NDRG1Q92597 394 aaKnown RBP11.57□□□□□ -0.56
COL6A3-203ENST00000353578 H3BSH0 61 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 SHC1P29353 583 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 GNG4P50150 75 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 RAB38P57729 211 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 FOXJ1Q92949 421 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 KCNK12Q9HB15 430 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 OR5AC2Q9NZP5 309 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 RNF181Q9P0P0 153 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 NAT8BQ9UHF3 227 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 GFRA2O00451 464 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 USP2O75604 605 aaPredicted RBP11.57□□□□□ -0.56
COL6A3-203ENST00000353578 C8orf89P0DMQ9 161 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 VEGFAP15692 232 aaPredicted RBP11.57□□□□□ -0.56
COL6A3-203ENST00000353578 TMEM164Q5U3C3 297 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 CDC20BQ86Y33 519 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 A0A0B4J203 849 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 CBX7O95931 251 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 F3P13726 295 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 PLA1AQ53H76 456 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 ESPNLQ6ZVH7 1005 aa11.57□□□□□ -0.56
COL6A3-203ENST00000353578 DOK3Q7L591 496 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms