RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 ETV2O00321 342 aaPredicted RBP19.44■□□□□ 0.7
SHMT1-202ENST00000352886 P2RY10O00398 339 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 CRYZL1O95825 349 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 OPN1LWP04000 364 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 GIPP09681 153 aaPredicted RBP19.44■□□□□ 0.7
SHMT1-202ENST00000352886 SNTA1Q13424 505 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 INPP5JQ15735 1006 aaPredicted RBP19.44■□□□□ 0.7
SHMT1-202ENST00000352886 DEGS2Q6QHC5 323 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 SLC36A1Q7Z2H8 476 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 CLEC1AQ8NC01 280 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 OR6N1Q8NGY5 312 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 GPX8Q8TED1 209 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 RNF133Q8WVZ7 376 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 TMEM185BQ9H7F4 350 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 B3GAT1Q9P2W7 334 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 WIF1Q9Y5W5 379 aa19.44■□□□□ 0.7
SHMT1-202ENST00000352886 MEGF11A6BM72 1044 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 ZFAND5O76080 213 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 HRGP04196 525 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 HYAL4Q2M3T9 481 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 TMEM244Q5VVB8 128 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 TMEM205Q6UW68 189 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 ADGRE4PQ86SQ3 457 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 POC1BQ8TC44 478 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 C11orf40Q8WZ69 217 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 RPH3AQ9Y2J0 694 aaPredicted RBP19.43■□□□□ 0.7
SHMT1-202ENST00000352886 WDFY3Q8IZQ1 3526 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 CD37P11049 281 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 MSX1P28360 303 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 STEAP1BQ6NZ63 245 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 OR10H5Q8NGA6 315 aa19.43■□□□□ 0.7
SHMT1-202ENST00000352886 A0A1W2PNV4 684 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 UBCP0CG48 685 aaKnown RBP19.42■□□□□ 0.7
SHMT1-202ENST00000352886 ACTBP60709 375 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 ACTG1P63261 375 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 NHLRC1Q6VVB1 395 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 PPP1R3BQ86XI6 285 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 IQCF2Q8IXL9 164 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 FAM109AQ8N4B1 249 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 OR5M1Q8NGP8 315 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 SLAMF6Q96DU3 332 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 WDR89Q96FK6 387 aaPredicted RBP19.42■□□□□ 0.7
SHMT1-202ENST00000352886 RBP7Q96R05 134 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 FANCFQ9NPI8 374 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 SIT1Q9Y3P8 196 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 UBE2QL1A1L167 161 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 LEUTXA8MZ59 168 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 GABRA1P14867 456 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 MMP16P51512 607 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 P2RX3P56373 397 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 SSBP1Q04837 148 aaKnown RBP19.42■□□□□ 0.7
SHMT1-202ENST00000352886 EXOSC2Q13868 293 aaKnown RBP19.42■□□□□ 0.7
SHMT1-202ENST00000352886 SLC25A53Q5H9E4 307 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 OR10K2Q6IF99 312 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 SAP25Q8TEE9 199 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 SEH1LQ96EE3 360 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 SDHAF3Q9NRP4 125 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 TRIOBPQ9H2D6 2365 aa19.42■□□□□ 0.7
SHMT1-202ENST00000352886 EML6Q6ZMW3 1958 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 LPLP06858 475 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 GRK1Q15835 563 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 GABRG1Q8N1C3 465 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 AKIRIN1Q9H9L7 192 aaPredicted RBP19.41■□□□□ 0.7
SHMT1-202ENST00000352886 FAM206AQ9NX38 181 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 FBXL2Q9UKC9 423 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 OR2M5A3KFT3 312 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 OR2A4O95047 310 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 ACSM4P0C7M7 580 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 RAP2BP61225 183 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 FOXK1P85037 733 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 FAM198BQ6UWH4 519 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 OR4D6Q8NGJ1 314 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 OR2A7Q96R45 310 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 MRPL13Q9BYD1 178 aaKnown RBP19.41■□□□□ 0.7
SHMT1-202ENST00000352886 ZMAT3Q9HA38 289 aaKnown RBP19.41■□□□□ 0.7
SHMT1-202ENST00000352886 KLHL13Q9P2N7 655 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 CYB5R1Q9UHQ9 305 aa19.41■□□□□ 0.7
SHMT1-202ENST00000352886 TMEM265A0A087WTH1 108 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 LOC390937A0A1W2PQ73 354 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 M0R233 179 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 LDLRAD4O15165 306 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 IFNA7P01567 189 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 C3orf33Q6P1S2 294 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 GPAT4Q86UL3 456 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 UEVLDQ8IX04 471 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 NKAIN3Q8N8D7 197 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 SLC22A8Q8TCC7 542 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 FGGYQ96C11 551 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 IGLV3-32A0A0A0MS00 114 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 A0A1W2PNR3 127 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 A0A1W2PPL8 197 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 SULT1C2O00338 296 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 TTRP02766 147 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 TAS2R19P59542 299 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 UBE2MP61081 183 aaKnown RBP19.4■□□□□ 0.7
SHMT1-202ENST00000352886 MOGAT2Q3SYC2 334 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 ESCO2Q56NI9 601 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 C1orf100Q5SVJ3 147 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 KLHL24Q6TFL4 600 aa19.4■□□□□ 0.7
SHMT1-202ENST00000352886 UXS1Q8NBZ7 420 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms