RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PCGF3Q3KNV8 242 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ZNF528Q3MIS6 628 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 B3GLCTQ6Y288 498 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 YRDCQ86U90 279 aaKnown RBP10.98□□□□□ -0.65
SMAD9-201ENST00000350148 RBPMSQ93062 196 aaKnown RBP10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ZG16BQ96DA0 208 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 SLAMF6Q96DU3 332 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ARSGQ96EG1 525 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ELMOD3Q96FG2 381 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 AKIP1Q9NQ31 210 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 TRAPPC4Q9Y296 219 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 LOC100289279A0A1B0GTE1 492 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 MAGEB4O15481 346 aaPredicted RBP10.98□□□□□ -0.65
SMAD9-201ENST00000350148 CT45A8P0DMV1 189 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 CT45A9P0DMV2 189 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 TNFSF4P23510 183 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 GXYLT1Q4G148 440 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 CT45A2Q5DJT8 189 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ACER2Q5QJU3 275 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 CCDC71LQ8N9Z2 235 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 R4GN57 208 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 TRAV17A0A0B4J275 112 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ACOD1A6NK06 481 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ZNF736B4DX44 427 aaPredicted RBP10.98□□□□□ -0.65
SMAD9-201ENST00000350148 FFAR1O14842 300 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 DNPH1O43598 174 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ATG12O94817 140 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 CHRM2P08172 466 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 SELEP16581 610 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 DOC2BQ14184 412 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 P2RY14Q15391 338 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 NPSR1Q6W5P4 371 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 OR2T35Q8NGX2 323 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 POC1BQ8TC44 478 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 CT55Q8WUE5 264 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ST8SIA4Q92187 359 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 MUCL1Q96DR8 90 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 KTI12Q96EK9 354 aaPredicted RBP10.98□□□□□ -0.65
SMAD9-201ENST00000350148 OR14A2Q96R54 314 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 DOK1Q99704 481 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 TCFL5Q9UL49 500 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 RBMXL2O75526 392 aaKnown RBP10.98□□□□□ -0.65
SMAD9-201ENST00000350148 SERPINA5P05154 406 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 CBR1P16152 277 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 CNR1P21554 472 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 PCP4P48539 62 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 NOVA1P51513 510 aaKnown RBP10.98□□□□□ -0.65
SMAD9-201ENST00000350148 RAC1P63000 192 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 RNF212Q495C1 297 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 FCRLAQ7L513 359 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ST7LQ8TDW4 575 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 FBXO34Q9NWN3 711 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 SH3BGRL2Q9UJC5 107 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 PCDHGA1Q9Y5H4 931 aa10.98□□□□□ -0.65
SMAD9-201ENST00000350148 ANKRD36A6QL64 1941 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 OR2W5A6NFC9 320 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 SPDEFO95238 335 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 AMY2AP04746 511 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 TGM1P22735 817 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 RPS19P39019 145 aaKnown RBP10.97□□□□□ -0.65
SMAD9-201ENST00000350148 SKP2Q13309 424 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 LRRC37A5PQ49AS3 106 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 PLCXD3Q63HM9 321 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 PAQR6Q6TCH4 344 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 TXNDC15Q96J42 360 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 KLHL13Q9P2N7 655 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 NLKQ9UBE8 527 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 DSPPQ9NZW4 1301 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 SMAD9O15198 467 aaKnown RBP10.97□□□□□ -0.65
SMAD9-201ENST00000350148 ZNF169Q14929 603 aaPredicted RBP10.97□□□□□ -0.65
SMAD9-201ENST00000350148 HES3Q5TGS1 186 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 GTF2H5Q6ZYL4 71 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 ADGRE4PQ86SQ3 457 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 C10orf111Q8N326 155 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 OR52H1Q8NGJ2 320 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 ZFP64Q9NPA5 681 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 ACOXLQ9NUZ1 547 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 A0A1W2PQ09 198 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 CYCSP99999 105 aaKnown RBP10.97□□□□□ -0.65
SMAD9-201ENST00000350148 SPOCK1Q08629 439 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 XAF1Q6GPH4 301 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 MAMSTRQ6ZN01 415 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 OPA3Q9H6K4 179 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 CALHM2Q9HA72 323 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 OR2S2Q9NQN1 319 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 DHHO43323 396 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 TGOLN2O43493 480 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 SP9P0CG40 484 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 TAS2R46P59540 309 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 DUSP2Q05923 314 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 DHRS13Q6UX07 377 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 GDPD3Q7L5L3 318 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 SLC51BQ86UW2 128 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 ZNF561Q8N587 486 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 CNEP1R1Q8N9A8 125 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 TMEM52Q8NDY8 209 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 OR10G3Q8NGC4 313 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 CTHRC1Q96CG8 243 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 OR10A4Q9H209 315 aa10.97□□□□□ -0.65
SMAD9-201ENST00000350148 BORCS7-ASMTA0A0B4J1R7 106 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms