RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 F2RL3Q96RI0 385 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 UCN2Q96RP3 112 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 PAAF1Q9BRP4 392 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 RHBGQ9H310 441 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 ASCL3Q9NQ33 180 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 OR2S2Q9NQN1 319 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 PITPNC1Q9UKF7 332 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SIGLEC7Q9Y286 467 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 MRPS33Q9Y291 106 aaKnown RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF443Q9Y2A4 671 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 PPIL1Q9Y3C6 166 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 FAM186AA6NE01 2351 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 TECTAO75443 2155 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 C9J4A7 227 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 M0R296 226 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 NUDT21O43809 227 aaKnown RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST1H2BKO60814 126 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 ARG1P05089 322 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 RPLP1P05386 114 aaKnown RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 RPLP2P05387 115 aaKnown RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST1H2BJP06899 126 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF735P0CB33 412 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 TMIGD3P0DMS9 266 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 VSIG8P0DPA2 414 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 FABP4P15090 132 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST1H2BOP23527 126 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 G0S2P27469 103 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 IL2RGP31785 369 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST1H2BBP33778 126 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SERPINF1P36955 418 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 NBL1P41271 181 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 DHPSP49366 369 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SUCLG1P53597 346 aaKnown RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 FXYD6P3P58550 94 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST1H2BDP58876 126 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST1H2BCP62807 126 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SKP1P63208 163 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 PLA2G7Q13093 441 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 NR0B2Q15466 257 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST2H2BEQ16778 126 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 C9orf64Q5T6V5 341 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 TMEM268Q5VZI3 342 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 WDR88Q6ZMY6 472 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 BIVMQ86UB2 503 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 OR13C8Q8NGS7 320 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 OVCA2Q8WZ82 227 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 DVL3Q92997 716 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST1H2BHQ93079 126 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SPACA7Q96KW9 195 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 WDR92Q96MX6 357 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 TGM7Q96PF1 710 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST1H2BNQ99877 126 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 HIST1H2BMQ99879 126 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 MS4A8Q9BY19 250 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 EIF5A2Q9GZV4 153 aaKnown RBP7.35□□□□□ -1.23
ATG4A-201ENST00000343524 DPEP2Q9H4A9 486 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SMOC1Q9H4F8 434 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 GLIPR2Q9H4G4 154 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 PELI2Q9HAT8 420 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SLC23A2Q9UGH3 650 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 SERTAD3Q9UJW9 196 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 FBXO7Q9Y3I1 522 aa7.35□□□□□ -1.23
ATG4A-201ENST00000343524 CACNA1HO95180 2353 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 BRWD1Q9NSI6 2320 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 TPRP12270 2363 aaKnown RBP7.34□□□□□ -1.23
ATG4A-201ENST00000343524 CXorf51AA0A1B0GTR3 108 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 C13orf42A0A1B0GVH6 325 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 C17orf102A2RUQ5 167 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 TMEM235A6NFC5 223 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 TMEM212A6NML5 194 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 MEIS3P2A8K0S8 358 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 TRDCB7Z8K6 153 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 C9JQL5 133 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 SLC17A2O00624 439 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 AGPAT2O15120 278 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 FRS3O43559 492 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 SCGNO76038 276 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 ZFPL1O95159 310 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 C1orf105O95561 183 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 APBB3O95704 486 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 HMGN2P05204 90 aaKnown RBP7.34□□□□□ -1.23
ATG4A-201ENST00000343524 CA3P07451 260 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 OR4Q2P0C623 313 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 OR8U9P0C7N5 309 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 EDN3P14138 238 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 CSRP1P21291 193 aaKnown RBP7.34□□□□□ -1.23
ATG4A-201ENST00000343524 EPHA1P21709 976 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 AKT2P31751 481 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 BSGP35613 385 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 SPINT3P49223 89 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 DIO1P49895 249 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 CCR4P51679 360 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 SNRPNP63162 240 aaKnown RBP7.34□□□□□ -1.23
ATG4A-201ENST00000343524 H3F3AP84243 136 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 FNDC3BQ53EP0 1204 aaKnown RBP7.34□□□□□ -1.23
ATG4A-201ENST00000343524 PRAMEF14Q5SWL7 426 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 GGNBP1Q5YKI7 109 aa7.34□□□□□ -1.23
ATG4A-201ENST00000343524 CD300LGQ6UXG3 332 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms