RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 RGS7BPQ6MZT1 257 aaPredicted RBP13.12□□□□□ -0.31
UBE3B-201ENST00000340074 SLC18B1Q6NT16 456 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 PLBD1Q6P4A8 553 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 PRSS57Q6UWY2 283 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 CFAP77Q6ZQR2 320 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 LRP11Q86VZ4 500 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 ZNF511Q8NB15 262 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 OR1J1Q8NGS3 322 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 OR2AJ1Q8NGZ0 328 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 OR1F12Q8NHA8 337 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 SLC7A6Q92536 515 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 DOK1Q99704 481 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 SYT3Q9BQG1 590 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 OSBPL10Q9BXB5 764 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 TEX12Q9BXU0 123 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 BCL2L14Q9BZR8 327 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 WDR76Q9H967 626 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 TVP23BQ9NYZ1 205 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 EIF3KQ9UBQ5 218 aaKnown RBP13.12□□□□□ -0.31
UBE3B-201ENST00000340074 COMMD3-BMI1R4GMX3 469 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 FLNAP21333 2647 aaKnown RBP13.11□□□□□ -0.31
UBE3B-201ENST00000340074 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-201ENST00000340074 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-201ENST00000340074 PSKH1P11801 424 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 SNAPC1Q16533 368 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 ELFN2Q5R3F8 820 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 LINC01590Q5TEZ4 76 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 TMEM154Q6P9G4 183 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 TGIF2LYQ8IUE0 185 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 ABHD4Q8TB40 342 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 PLEKHA8Q96JA3 519 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 C4orf45Q96LM5 186 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 RBM4BQ9BQ04 359 aaKnown RBP13.11□□□□□ -0.31
UBE3B-201ENST00000340074 OR51V1Q9H2C8 321 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 HINT3Q9NQE9 182 aaKnown RBP13.11□□□□□ -0.31
UBE3B-201ENST00000340074 DUSP13Q9UII6 198 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 KCNG2Q9UJ96 466 aa13.11□□□□□ -0.31
UBE3B-201ENST00000340074 F8P00451 2351 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 ANKRD65E5RJM6 399 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 ICMTO60725 284 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 ABHD16AO95870 558 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 NGFP01138 241 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 DBHP09172 617 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 SPATA46Q5T0L3 261 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 RFPL4BQ6ZWI9 263 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 CPOQ8IVL8 374 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 MAP6Q96JE9 813 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 Q96MF0 132 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 PITX2Q99697 317 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 VRK1Q99986 396 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-201ENST00000340074 HDHD2Q9H0R4 259 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 MYEF2Q9P2K5 600 aaKnown RBP13.1□□□□□ -0.31
UBE3B-201ENST00000340074 ENOPH1Q9UHY7 261 aa13.1□□□□□ -0.31
UBE3B-201ENST00000340074 ZAR1LA6NP61 321 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 ZNF593O00488 134 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-201ENST00000340074 GLCEO94923 617 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 CLPTM1O96005 669 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 SPARCP09486 303 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 ZNF250P15622 560 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 POLR2IP36954 125 aaKnown RBP13.09□□□□□ -0.31
UBE3B-201ENST00000340074 EVX1P49640 407 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 ENTPD1P49961 510 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 PPOXP50336 477 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 BLVRAP53004 296 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 PPP1CBP62140 327 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 KLHL12Q53G59 568 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 ARL9Q6T311 187 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 UNQ6126/PRO20091Q6UXV3 157 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 CXXC5Q7LFL8 322 aaKnown RBP13.09□□□□□ -0.31
UBE3B-201ENST00000340074 ZCCHC24Q8N2G6 241 aaKnown RBP13.09□□□□□ -0.31
UBE3B-201ENST00000340074 PQLC1Q8N2U9 271 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 BBS1Q8NFJ9 593 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 SYNPRQ8TBG9 265 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 SORCS2Q96PQ0 1159 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 COQ7Q99807 217 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 ELOVL3Q9HB03 270 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 PNRC2Q9NPJ4 139 aaKnown RBP13.09□□□□□ -0.31
UBE3B-201ENST00000340074 ATPIF1Q9UII2 106 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 GRIP1Q9Y3R0 1128 aa13.09□□□□□ -0.31
UBE3B-201ENST00000340074 M0R129 80 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 EI24O14681 340 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 PRKYO43930 277 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 SSX4O60224 188 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 ALPLP05186 524 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 ADRA2AP08913 450 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 GSTT1P30711 240 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 ALDH3B1P43353 468 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 NUDT6P53370 316 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 KLF3P57682 345 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-201ENST00000340074 MAD2L1BPQ15013 274 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-201ENST00000340074 PCK2Q16822 640 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 RSPO1Q2MKA7 263 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-201ENST00000340074 SLX4IPQ5VYV7 408 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 ERI1Q8IV48 349 aaKnown RBP13.08□□□□□ -0.32
UBE3B-201ENST00000340074 C1orf174Q8IYL3 243 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 STMN2Q93045 179 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 ZMYND19Q96E35 227 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-201ENST00000340074 MARS2Q96GW9 593 aaKnown RBP13.08□□□□□ -0.32
UBE3B-201ENST00000340074 ATF6BQ99941 703 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms