RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CXorf36Q9H7Y0 433 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 MUTYHQ9UIF7 546 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 SNX11Q9Y5W9 270 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 SPAG17Q6Q759 2223 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 PPP5D1E7EU14 171 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 DNPH1O43598 174 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 H2AFB1P0C5Y9 115 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 TRAPPC2P0DI81 140 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 TRAPPC2BP0DI82 140 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 RPS23P62266 143 aaKnown RBP10.77□□□□□ -0.69
SHANK2-201ENST00000338508 HSF1Q00613 529 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 PMP22Q01453 160 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 HMGN3Q15651 99 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 Q499Y3 187 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 AVPI1Q5T686 147 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 ACSM6Q6P461 480 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 DPY19L2P2Q6ZN68 376 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 GTF2H5Q6ZYL4 71 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 OR5H6Q8NGV6 325 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 MKRN2Q9H000 416 aaKnown RBP10.77□□□□□ -0.69
SHANK2-201ENST00000338508 UNCXA6NJT0 531 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 LRRC3CA6NJW4 275 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 GPR171O14626 319 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 ZXDAP98168 799 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 NKAIN1Q4KMZ8 207 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 C17orf99Q6UX52 265 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 MRPL10Q7Z7H8 261 aaKnown RBP10.77□□□□□ -0.69
SHANK2-201ENST00000338508 CHCHD4Q8N4Q1 142 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 SLC37A2Q8TED4 501 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 RTP4Q96DX8 246 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 CHST8Q9H2A9 424 aa10.77□□□□□ -0.69
SHANK2-201ENST00000338508 GAR1Q9NY12 217 aaKnown RBP10.77□□□□□ -0.69
SHANK2-201ENST00000338508 BMPR1BO00238 502 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 CNMDO75829 334 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 PENKP01210 267 aaPredicted RBP10.76□□□□□ -0.69
SHANK2-201ENST00000338508 RRASP10301 218 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 ASCL1P50553 236 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 TPMTP51580 245 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 UBALD1Q8TB05 177 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 PKMYT1Q99640 499 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 A0A1B0GVG6 124 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 ALDOCP09972 364 aaKnown RBP10.76□□□□□ -0.69
SHANK2-201ENST00000338508 INSM1Q01101 510 aaPredicted RBP10.76□□□□□ -0.69
SHANK2-201ENST00000338508 HENMT1Q5T8I9 393 aaKnown RBP10.76□□□□□ -0.69
SHANK2-201ENST00000338508 SPNS3Q6ZMD2 512 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 TGIF2LYQ8IUE0 185 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 NAA50Q9GZZ1 169 aaKnown RBP10.76□□□□□ -0.69
SHANK2-201ENST00000338508 OCEL1Q9H607 264 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 CNOT2Q9NZN8 540 aaKnown RBP10.76□□□□□ -0.69
SHANK2-201ENST00000338508 FLVCR1Q9Y5Y0 555 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 A0A1W2PR80 420 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 XKRY2A2RUG3 117 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 G3V3Q6 166 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 SPINK4O60575 86 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 PSMB1P20618 241 aaKnown RBP10.76□□□□□ -0.69
SHANK2-201ENST00000338508 PRSS36Q5K4E3 855 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 MORN1Q5T089 497 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 ETFBKMTQ8IXQ9 262 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 GABRG1Q8N1C3 465 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 SORT1Q99523 831 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 MAGT1Q9H0U3 335 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 BRWD1Q9NSI6 2320 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 ATP6V1G2-DDX39BF2Z307 99 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 M0R082 166 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 RBP2P50120 134 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 TMEM207Q6UWW9 146 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 C1orf87Q8N0U7 546 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 ARHGEF39Q8N4T4 335 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 SCPEP1Q9HB40 452 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 CLEC1BQ9P126 229 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 CLEC2DQ9UHP7 191 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 PIK3C2AO00443 1686 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 SLC25A4P12235 298 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 RELAQ04206 551 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 KIAA0141Q14154 515 aaPredicted RBP10.76□□□□□ -0.69
SHANK2-201ENST00000338508 OR10V1Q8NGI7 309 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 TM4SF18Q96CE8 201 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 NUDT9Q9BW91 350 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 C6orf106Q9H6K1 298 aaPredicted RBP10.76□□□□□ -0.69
SHANK2-201ENST00000338508 TRAPPC4Q9Y296 219 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 BOLA1Q9Y3E2 137 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 PPP1R2P9O14990 202 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 POLR2IP36954 125 aaKnown RBP10.76□□□□□ -0.69
SHANK2-201ENST00000338508 ASH2LQ9UBL3 628 aa10.76□□□□□ -0.69
SHANK2-201ENST00000338508 ZNF701M0R085 212 aaPredicted RBP10.75□□□□□ -0.69
SHANK2-201ENST00000338508 LY86O95711 162 aa10.75□□□□□ -0.69
SHANK2-201ENST00000338508 PDGFBP01127 241 aaPredicted RBP10.75□□□□□ -0.69
SHANK2-201ENST00000338508 ZNF239Q16600 458 aaKnown RBP10.75□□□□□ -0.69
SHANK2-201ENST00000338508 PXDC1Q5TGL8 231 aa10.75□□□□□ -0.69
SHANK2-201ENST00000338508 OR2Z1Q8NG97 314 aa10.75□□□□□ -0.69
SHANK2-201ENST00000338508 ERGIC1Q969X5 290 aa10.75□□□□□ -0.69
SHANK2-201ENST00000338508 GMPR2Q9P2T1 348 aaKnown RBP10.75□□□□□ -0.69
SHANK2-201ENST00000338508 PAPLNO95428 1278 aa10.75□□□□□ -0.69
SHANK2-201ENST00000338508 USF1P22415 310 aaPredicted RBP10.75□□□□□ -0.69
SHANK2-201ENST00000338508 TRIM23P36406 574 aa10.75□□□□□ -0.69
SHANK2-201ENST00000338508 C1orf220Q5T0J3 134 aa10.75□□□□□ -0.69
SHANK2-201ENST00000338508 OR2T11Q8NH01 316 aa10.75□□□□□ -0.69
SHANK2-201ENST00000338508 LIN7CQ9NUP9 197 aaKnown RBP10.75□□□□□ -0.69
SHANK2-201ENST00000338508 TREM2Q9NZC2 230 aa10.75□□□□□ -0.69
SHANK2-201ENST00000338508 ZNF391Q9UJN7 358 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms